Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0976 ATGGCAGATCCTTCGATTCTTCTGGATTTGGTGGAGAAGTTTTCAGATATTGCAGGAAGAGGCATGGAGTACAAAAGCACTCGCGAGGTTCTGGAGTCAACCACCAAGGATTTGGGCCCATTGATTGAGGATATTGCACGATACGTCAAGGACAACGATATTGAAACTGAAGAAATAGAGCAGCTGAAGAAGAAAATAGAAGCAAACCAGGAGGTTCTTGACAAGTACAAAATCCACGGGGGGAATTTCTTGCTTGCCCCATATTTTCAGACAAAGCTCGATGGAGAGTACCAGTCACTTCAAAGGTACTGCTCAGTTCAGATGCAAACACAGATTGCAAGGGATTTGAAGAAACTCCTGTCCAACTTGAGTTCTGATGATAATAATAGCACCCTTACTAGCGAAAGCATCTCATCTCAAGTGCCTAAAAGAATCAGACTTAGGAGCGAAAGCATCTCACCTCGAGGGTCTAAAAGAATCAGAACACAAACATTTAAGAGTAATCTTGAAATATTCCCAGAATTTATAGTGGGATTGGATGGTCCGTTCATGAAGGAGTTGAAGTCTAAGCTTCTTCTTGGGGATGAGCAGGTCTTGAATTTGCATGGTCTAGCAGGCTCAGGGAAGACCACTTTGGCTAAAAAACTCTGTCATGATCCCCAGGTCAAAGATAAGTTCAAGAACATCATCTTTGAGACCTTGGGCTCACAATTTCGAGGCAACGAAGCAATCAATGAATTGCAAGACCGACTGCCTGAGTTCAGGGAAAATCCAGTGTTGTTGCTTTTGGATGATGTTTGGCCTGCCTCAAAAAATTTTGTTGAGGAGTTTAGAGCCCAAATATCAGCAGGCTCTAAAATTTTCTTAACTTCAAGAGTTCCAATTACCACGCTTGGCACCCAATGCCCCATGGAACAACTTTCTGAAAATGATGCAGTGGATCTTTTCCTTCACTTTGTTCAACCAAGCAACATTGATTTTGGTGACCAAGAAACACGAAAAATTGTCCTGCAGATAGTGAAAGGTTGCAAATGTCTGCCGATTGCTCTTAAATTCATCGGTTGTGAACTACAAGATAAGGGCATTGAGGAGCTGCAAAAGGTGCAGTTAGAATGGTCTCGCGGTCAGTCTATTCTTGATTCTTATTCAGATTTGCTTGCCCATCTCCAAAATTCCCTGGATCTGCTGGTAGATGCGCCCATCAGGGAATGCTTCATGGACCTTGGGTTATTTCCTGAAGATCAAAAGATACCTGTTTCTGCTTTGATTGACATCTGGTCCGAACTTTATAACCTTGATGAACTTGGAATATGTGCAATGACCTTCATTCGCAAATTAACAGACCTGAATTTAGCTGCTGGGATCAAAGTTAGAAGGATAGTTGGAAGGGTTGAAGACAATTACTACAATAACCACTTCCTTGTGCAACATGATCTTTTCAGAGAGTTGGCCATACATATAAACAACCAGGAACCATTTGAGATTAGGAAAAGACTGATCGTTGACATGAATGGGAATCGTCGTCCAGAATGGTGGCCTCAGCAGCAAGGCATCCCTGCCCACACCTTATCCTATTTTACCAAATGGTTTAAGGACCCAAATCAGAAAAGGGTATCTGCTCCTATATTGTCAATATCAACAGATCAAAAGATCAATCCAGATTGGTGCAACGTTCAAGCAAGTAATGTTATTGTTATGGTTTTGAATCTGAAGACGACAGAATACACTTTACCTGAATTCATTAAGAAAATGAGAAACCTTAGAGTTCTCATAGTCACCAATTATGGCTTCCGTCCCACAGAGTTAAAAAACCTTGGGTTTCTTGAGTCTTTATGGACACTCAAAAGAATCAGATTGGAGGGGGTTTCAGTTCCTCCCCTTTGTAGATTGAAGAACGTGTGCAAGTTATCACTTTATATGTGTGTAGTGAAGAAGGCTTTTGAAAACAGTTCTATTGAATTCTCAAAGGTAATGCCTAATCTGGTGGACTTGAACATTGAATACTGCAAAAATTTGGTTAAGTTGCCAGCTGGGCTCTGTGACTCTGCCACCCTGAAGAAGCTCAGCATCAGTCACTGCCACAAGTTTACTGTACTTCCACAAGAAATTGGGAACCTTGAGAACTTGGAATTACTAAGGATTAGTTACTGCGCTGATTTTGAAGAGATGCCAAAGTCAATAACAAAGTTGAGGAATCTGATGTTTCTTGACATCTCCTACTGTGTAAGCCTCAGGAAATTACCAGACAACATCGGTGAGCTAAAGAGTCTGAGAAAGTTTTATATGACGAGTTGTCCAATAAACGAATTGCCAGACTCAATCATGAATATGGAGCATCTAGAGAGTGTTTTATGCGATGAGTATACATATCCTTTCTGGGAACTTATCAAATTTGTCTTTTCTGGACTAAACATAAAGACAGCCGTGCACATTGGCTTAGATTGGCTTCCTGATTTTGGTTCCCCAGGCTTGTTCCATTAA 2481 0.4119 MADPSILLDLVEKFSDIAGRGMEYKSTREVLESTTKDLGPLIEDIARYVKDNDIETEEIEQLKKKIEANQEVLDKYKIHGGNFLLAPYFQTKLDGEYQSLQRYCSVQMQTQIARDLKKLLSNLSSDDNNSTLTSESISSQVPKRIRLRSESISPRGSKRIRTQTFKSNLEIFPEFIVGLDGPFMKELKSKLLLGDEQVLNLHGLAGSGKTTLAKKLCHDPQVKDKFKNIIFETLGSQFRGNEAINELQDRLPEFRENPVLLLLDDVWPASKNFVEEFRAQISAGSKIFLTSRVPITTLGTQCPMEQLSENDAVDLFLHFVQPSNIDFGDQETRKIVLQIVKGCKCLPIALKFIGCELQDKGIEELQKVQLEWSRGQSILDSYSDLLAHLQNSLDLLVDAPIRECFMDLGLFPEDQKIPVSALIDIWSELYNLDELGICAMTFIRKLTDLNLAAGIKVRRIVGRVEDNYYNNHFLVQHDLFRELAIHINNQEPFEIRKRLIVDMNGNRRPEWWPQQQGIPAHTLSYFTKWFKDPNQKRVSAPILSISTDQKINPDWCNVQASNVIVMVLNLKTTEYTLPEFIKKMRNLRVLIVTNYGFRPTELKNLGFLESLWTLKRIRLEGVSVPPLCRLKNVCKLSLYMCVVKKAFENSSIEFSKVMPNLVDLNIEYCKNLVKLPAGLCDSATLKKLSISHCHKFTVLPQEIGNLENLELLRISYCADFEEMPKSITKLRNLMFLDISYCVSLRKLPDNIGELKSLRKFYMTSCPINELPDSIMNMEHLESVLCDEYTYPFWELIKFVFSGLNIKTAVHIGLDWLPDFGSPGLFH 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0976 826 Coils Coil 45 79 - -
Lele41g0976 826 Pfam NB-ARC domain 184 368 IPR002182 GO:0043531
Lele41g0976 826 Gene3D - 392 485 IPR036388 -
Lele41g0976 826 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 10 816 IPR039203 GO:0050832
Lele41g0976 826 PRINTS Disease resistance protein signature 343 357 - -
Lele41g0976 826 PRINTS Disease resistance protein signature 728 744 - -
Lele41g0976 826 PRINTS Disease resistance protein signature 198 213 - -
Lele41g0976 826 Gene3D - 156 299 IPR027417 -
Lele41g0976 826 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 173 408 IPR027417 -
Lele41g0976 826 SUPERFAMILY RNI-like 571 785 - -
Lele41g0976 826 Gene3D - 306 391 IPR042197 -
Lele41g0976 826 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 13 126 IPR008808 -
Lele41g0976 826 Gene3D Ribonuclease Inhibitor 536 793 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0976 Lele-ChrLele41 19210869 19214667 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0976 610 784 WRKY Transcription Factor Family AT4G12020 28.643 1.07e-09 60.5