Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0969 ATGCAACTGCAGACTGATGGTGAGAGTGCTCCGAACACTCTAGTTATAGCAGAGTGTGAGATTATGAAGCCTAGGGTTGCATCGGAGGATATTAGAAGGTTTCATGAAGACGCTCGCTCCCCCATTATCAGGAAGCAAAAATCCATTATTCACCCCGGAGAGGTGAACAGAATAAGGGAAATGCCACAACATAATAATCTGTTAGTAACACACACAGATACACCCGAGGTAATGATTTGGGATATCGACTCTCAACCAGCTCGCCATGTTATCCCTGGAGCTTCAAATTCCATGCCCACTCTGATACTGGCTGGGCACACAGATGTTGCTCAATTTGCTTTGGCTGTTTCTCCTTCTCAACCCTATGTTCTTTCTGGAGGGAAGGACAAGAATGTTGTTTTATGGAGTGTGAATGACGAAATCACAACTTTAGCAGCGGCACCACCCTACTTTAGAATTCCTCCTCGTTTTGGTCGAGATAATTACTATTATAACCCTGTTGTGGGCCCACGTGCCACCTTCGTAGGACACACTGATACTGTTGAGGATGTCGAATTTAACCCCGCAAAGCCAAATTCTGTTCTCAAGGTCGAGGGAGCTAATGACGAAGATATTCACTGTGTCGAATGGAATAAATTCAATACTCATTATATTCTCACTGGTTCTGCTGATAGGCACAAGGCAATTGAATTCCAGTGGAATCCTTCTGATCCATGGACAATTCTTAGTCTGTCTCATGATTGCAGAGGCCGCGGAGGAGGTAACTTACAGATGCGTGAGAGGAAACAGCAGAAACAAAGTCGGCGTCTTCAACTGGGTCACAGTTTCTAG 831 0.4501 MQLQTDGESAPNTLVIAECEIMKPRVASEDIRRFHEDARSPIIRKQKSIIHPGEVNRIREMPQHNNLLVTHTDTPEVMIWDIDSQPARHVIPGASNSMPTLILAGHTDVAQFALAVSPSQPYVLSGGKDKNVVLWSVNDEITTLAAAPPYFRIPPRFGRDNYYYNPVVGPRATFVGHTDTVEDVEFNPAKPNSVLKVEGANDEDIHCVEWNKFNTHYILTGSADRHKAIEFQWNPSDPWTILSLSHDCRGRGGGNLQMRERKQQKQSRRLQLGHSF 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0969 276 ProSiteProfiles Trp-Asp (WD) repeats profile. 113 145 IPR001680 GO:0005515
Lele41g0969 276 Pfam WD domain, G-beta repeat 100 136 IPR001680 GO:0005515
Lele41g0969 276 SMART WD40_4 188 232 IPR001680 GO:0005515
Lele41g0969 276 SMART WD40_4 96 136 IPR001680 GO:0005515
Lele41g0969 276 Gene3D - 193 257 IPR015943 GO:0005515
Lele41g0969 276 MobiDBLite consensus disorder prediction 254 276 - -
Lele41g0969 276 Gene3D - 1 192 IPR015943 GO:0005515
Lele41g0969 276 PANTHER WD40 REPEAT FAMILY 7 225 - -
Lele41g0969 276 SUPERFAMILY WD40 repeat-like 45 247 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0969 Lele-ChrLele41 19144441 19150516 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0969 41 19144441 19150516 Lele37g0324 37 2717727 2723140 CCT
Lele41g0969 41 19144441 19150516 Lele38g0307 38 2419146 2421252 CCT
Lele41g0969 41 19144441 19150516 Lele39g1099 39 19563599 19568913 CCT
Lele41g0969 41 19144441 19150516 Lele43g0427 43 3766133 3772919 hybridization
Lele41g0969 41 19144441 19150516 Lele44g0419 44 3106003 3121696 hybridization