Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0960 ATGTCTATCGGTTGCCCAAAATACATCCCACACTTCTTGGTCCAAGCGCATTTTGTCATTGCCGCCTACAATCTTGCCAATGTCTCCCCATCGGATTTTCAAACTTTGCTTGCTCTTCATGGTTCTCCTGATGATACTACAATTGCTACAGCTCAGTTCCTGCACTCCCTTATTACCTCCCTCTCTCCATTTGCTCCAACTAGTAATCAGAATGGATTTTCCTTGGAACTCACTGCTGCCCTGTTGGCCAAGGATAAATTCAATGCATTTGCCTTGATGCAACCCTTCTCTGAAGATAATGAACAGAGATCTGTCAGAGCTTATGGTATATACCCTTATGCCTCCTTCTTTAACCATGATTGCCTTCCCAATGCCTACAGATTTGATTATGTGGATACTAGTGCAACGGATGACAACCATAACACTGACATTATCATTAGGATGATCCATGATGTTCCTCAAGGTAGGGAGGTCTATTTGAGCTATTTCCCTGTGAATGAAAATTATTCTAGTAGGCAGAAAAGACTGGCGGAAGACTATGGCTTCACATGTAAGTGTGATCGATGTAATGTCGAAGCAAATTGGTCAGATAACGATAGTGTTGAGGATGATGTTGAGGATGTTGAAGAGGCGATGGAAGAGGATGAATGTGAAAATATGGCGGCTTCTGACACTGAAGTAATCCGCAAGGAGATAACAGTGATTTTCCCCATGCATATTTCTTTTTGA 729 0.4225 MSIGCPKYIPHFLVQAHFVIAAYNLANVSPSDFQTLLALHGSPDDTTIATAQFLHSLITSLSPFAPTSNQNGFSLELTAALLAKDKFNAFALMQPFSEDNEQRSVRAYGIYPYASFFNHDCLPNAYRFDYVDTSATDDNHNTDIIIRMIHDVPQGREVYLSYFPVNENYSSRQKRLAEDYGFTCKCDRCNVEANWSDNDSVEDDVEDVEEAMEEDECENMAASDTEVIRKEITVIFPMHISF 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0960 242 Gene3D - 18 89 - -
Lele41g0960 242 SUPERFAMILY SET domain 52 185 IPR046341 -
Lele41g0960 242 Coils Coil 198 225 - -
Lele41g0960 242 Gene3D SET domain 90 189 IPR046341 -
Lele41g0960 242 ProSiteProfiles SET domain profile. 55 163 IPR001214 GO:0005515
Lele41g0960 242 Pfam SET domain 97 162 IPR001214 GO:0005515
Lele41g0960 242 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 14 225 IPR044238 -
Lele41g0960 242 CDD SET_SMYD 87 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0960 Lele-ChrLele41 19088263 19089058 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele41g0960 SET 6e-10 No_clan