Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0945 ATGGAGATTTGTTTGTTAGCACTAATTTGCAAGTTACTACGGTCAATATATGTGCAACTAGCCAGAAACGTAAGCAGCTTGACACTGGCTCTGTCTACATTGCTCACCCACTTCCTTGAGCGGAAGCCATTAGAAAAAGATAAGATGGCCACAGTATCAGGGCAGCTCATATGGGAGATCGTGAAGAAGAACAACTCTTTTTTGGTTAAAGAGTTTGGCAGGGGCACTCAGAGCGTCGAGTTTAGCAAAGAGAGCAATAATCTCTACAATCTCAACTCTTTCAAACACTCTGGTTTGGCAAACAAGAAGACCATAACTATTCAACCTGCGGGTAAAGATCAATCTGTGTTGCTTGCAACTACCAAGACAAAGAAACAGAACAAGCCTGCTTCTTTGCTTCATAAATCTGTCATGAAAAAGGAGTTCCCAAGAATGGCAAAGGCTGTGGTAAACCAGGTGTCAGACAACCACTACAGGCCTGATCTTAAGAAGGCAGCCCTTGCAAGGTTAAGTGCTGTTCATAGGAGCCTCAAAGTTGCCAAGTCTGGTGTTAAGAAGAGGAACAGACAGGCTGTCAAGGTCCCTGGGAGAAAGTGA 597 0.4405 MEICLLALICKLLRSIYVQLARNVSSLTLALSTLLTHFLERKPLEKDKMATVSGQLIWEIVKKNNSFLVKEFGRGTQSVEFSKESNNLYNLNSFKHSGLANKKTITIQPAGKDQSVLLATTKTKKQNKPASLLHKSVMKKEFPRMAKAVVNQVSDNHYRPDLKKAALARLSAVHRSLKVAKSGVKKRNRQAVKVPGRK 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0945 198 FunFam 60S ribosomal protein L28 53 181 - -
Lele41g0945 198 Gene3D - 53 181 - -
Lele41g0945 198 Pfam Ribosomal L28e protein family 56 176 IPR029004 -
Lele41g0945 198 PANTHER 60S RIBOSOMAL PROTEIN L28 49 198 IPR002672 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0945 Lele-ChrLele41 18962704 18966922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0945 49 191 Cytoplasmic Ribosomal Protein Gene Family AT2G19730 74.825 2.30e-76 224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0945 41 18962704 18966922 Lele43g0452 43 3970114 3974005 hybridization
Lele41g0945 41 18962704 18966922 Lele44g0442 44 3315561 3317656 hybridization