Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0943 ATGGGCAACACGGAGAAGTTGATGAATCAGATCATGGAATTGAAATTCACCTCCAAGTCTCTTCAACGTCAAGCCCGTAAATGCGAGAAGGAAGAGAAATCTGAGAAGCTCAAGGTCAAGAAAGCCATGGAGAAAGCCAACATGGACGGCGCTCGCATCTACGCCGAGAACGCCATCCGAAAGCGAACCGAGCAGATGAACTATCTGCGCCTCTCCTCTCGGCTTGACGCCGTCGTGGCGCGGCTTGATACCCAAGCCAAGATGAGTACCATCAACAAGTCCATGGCTAATATCGTCAAGTCTCTCGAATCCTCCTTGGCCACCGGGAATCTCCAGAAGATGTCGGAGACCATGGACTCTTTCGAGAAGCAGTTTGTGAATATGGAGGTTCAAGCTGAGTTCATGGAGAGCGCCATGGCTGGATCCACCTCGCTTTCCACTCCTGAAGGAGAAGTCAACAGCTTGATGCAGCAGGTCGCCGATGATTATGGCCTCGAGGTCTCGGTGGGCCTGCCTCAGCCGGCATCTCACGCGGTGCCGACTAAGGAGACGGAGAAGGTGGACGAGGATGACTTGACTAAGCGACTTGCTGAGCTTAAGGCCAGAGGTTAA 612 0.531 MGNTEKLMNQIMELKFTSKSLQRQARKCEKEEKSEKLKVKKAMEKANMDGARIYAENAIRKRTEQMNYLRLSSRLDAVVARLDTQAKMSTINKSMANIVKSLESSLATGNLQKMSETMDSFEKQFVNMEVQAEFMESAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPASHAVPTKETEKVDEDDLTKRLAELKARG 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0943 203 Pfam Snf7 11 176 IPR005024 GO:0007034
Lele41g0943 203 Coils Coil 111 131 - -
Lele41g0943 203 MobiDBLite consensus disorder prediction 171 191 - -
Lele41g0943 203 Gene3D - 3 173 - -
Lele41g0943 203 Coils Coil 182 202 - -
Lele41g0943 203 Coils Coil 11 31 - -
Lele41g0943 203 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 13 200 IPR005024 GO:0007034
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0943 Lele-ChrLele41 18947521 18948132 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0943 41 18947521 18948132 Lele37g0341 37 2851341 2852666 CCT
Lele41g0943 41 18947521 18948132 Lele38g0322 38 2539060 2540382 CCT
Lele41g0943 41 18947521 18948132 Lele39g1083 39 19427918 19429222 CCT
Lele41g0943 41 18947521 18948132 Lele40g0301 40 2427074 2428399 CCT
Lele41g0943 41 18947521 18948132 Lele43g0456 43 3999289 3999903 hybridization
Lele41g0943 41 18947521 18948132 Lele44g0447 44 3345308 3345739 hybridization