Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0935 ATGAGGAAGAGCACGCTACTGTGGATTCTGGCTTTGCATGTGTTTGTTTCATTCCTTATTGTTAGCTACTCAGTTCAGGTTGTTGCAGACGGTGTTGGAAATTCAGTGAAAGAACGATACCCAGACGATACCTACGGTAGGTCATGGTTCCTCAATAGACACACTGAAAACTCAGAGCCAATCAACACAGCAGTTGCGATTAATGGTGATGAGTCAGACTATAAATTACCGAAAGAAGTGTTGCGCACTGCAATTCGATCACAGAACGGGAACAATCTAACTGGTTCAATTCCAAAGGCTCTAAGGGACAAGAACGGCACTTCTTTAACATTGAGTTTGGATGGAAATCCAAGTCTCTGTCAGATAGATTGCAAAACCAAAACACAGAAGCACATTATACCAATTATAGCATCTGTAGTAGCTTCTGTATCAGTCCTCGCAATAGTAGTCTGCATTTCTGTGAAGTTTTGCCAACATAAACGGAAAAACCAAACTGATATGGAAGGTATCCCAGTGAGGACTTCTTCATTTAAAAAGGCCGGGAATCTAAAAGCAAAAAATCGTGCGTTTGATCACTTGGAAGTCCTTAGTATTACCAACAACTTAGAAACCGTCATTGGACAAGGGGGATTTGGAAAAGTGTACCTTGGTACACTACAAGATGATACACAAGTTGCAGTCAAGTTACTCTTAAAGTCATCACAACAAGGGTTTAAGGAATTTCAGTCAGAGGCAGAACTTTTGATGGTTGTTGACCATAGGAACTTGGTTTCTCTTGTTGGCTATTGTAACGATGATAAGAACCCATGTGCTTTGAAATGGAATGAGAGGCTTCAGATCGCATTGGATGCAGCATGTGGTGTGTAATTCCATAGCTCTGGTAACCTGAATAAGAAAAGCGATGTTTATAGTTTTGGGATAATTCTACTCGAGCTTTTGACCGGTCGGCCGGCAGTAACAGGACCACCTGGCAACACAAATCACATATCAGATTGGGTGGCTCCAAAGCTGGAGAGGGGGGACATCAAAGCGATTATGGATCCGAGATTAGAAGGAAAATTCCATAGTGCTTCAGCATGGAAATTTCTAGAGATAGCCATGTCTTGCATTCCACCAGTTGCAATTCAAAGGCCTGATATAGGTCTTGTTGTAGCTGATTTAAAGGAATGTTTGGCCTTGGAAACATCCCTTCAAAGTGCTGAACGTAACAGTGCATTTTCTGGCTCTCCATTGAGCATCACTTATTTTCCACTTGAATCAAACTTAGCTCCATGTGCTAGGTAG 1284 0.4182 MRKSTLLWILALHVFVSFLIVSYSVQVVADGVGNSVKERYPDDTYGRSWFLNRHTENSEPINTAVAINGDESDYKLPKEVLRTAIRSQNGNNLTGSIPKALRDKNGTSLTLSLDGNPSLCQIDCKTKTQKHIIPIIASVVASVSVLAIVVCISVKFCQHKRKNQTDMEGIPVRTSSFKKAGNLKAKNRAFDHLEVLSITNNLETVIGQGGFGKVYLGTLQDDTQVAVKLLLKSSQQGFKEFQSEAELLMVVDHRNLVSLVGYCNDDKNPCALKWNERLQIALDAACGVXFHSSGNLNKKSDVYSFGIILLELLTGRPAVTGPPGNTNHISDWVAPKLERGDIKAIMDPRLEGKFHSASAWKFLEIAMSCIPPVAIQRPDIGLVVADLKECLALETSLQSAERNSAFSGSPLSITYFPLESNLAPCAR 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0935 427 SUPERFAMILY Protein kinase-like (PK-like) 188 385 IPR011009 -
Lele41g0935 427 Gene3D Phosphorylase Kinase; domain 1 181 272 - -
Lele41g0935 427 ProSiteProfiles Protein kinase domain profile. 200 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0935 427 Pfam Malectin-like domain 37 94 IPR024788 -
Lele41g0935 427 Gene3D Transferase(Phosphotransferase) domain 1 289 407 - -
Lele41g0935 427 PANTHER OS07G0107800 PROTEIN-RELATED 290 395 - -
Lele41g0935 427 FunFam receptor-like protein kinase FERONIA 164 272 - -
Lele41g0935 427 ProSitePatterns Protein kinases ATP-binding region signature. 206 228 IPR017441 GO:0005524
Lele41g0935 427 Pfam Protein tyrosine and serine/threonine kinase 202 269 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0935 Lele-ChrLele41 18886810 18895201 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0935 90 427 Receptor kinase-like Gene Family AT1G51830 33.410 4.21e-56 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele41g0935 PK_Tyr_Ser-Thr 2.7e-11 CL0016