Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0933 ATGGCAAAGGGAAATCTCCGGAACCTACTGTCAGATAAGAACCCAGATATTTTGAAGTGGAATGAGAGACTTCAAATTGCATTAGATGCAGCATGTGGATTGGACTATCTGCATAATGGTTGTAAGCCACCAATAATCCACAGAGACCTAAAATGTGCTAACATCTTGCTAAGTGAAAACATGCAAGCCAAGATTGCTGATTTCGGACTATCTAAAGCTTTTGCGAATGATACTGATACTCATATTTCAACTCGCCCGGCAGGCACTTTTGGTTACCTCGACCCTGAGTTCCATAGAACTGGAAACTTGAACAAGAAAAGCGATGTTTATAGTTTTGGGATAATTCTACTGGAGCTAATGACAGGACAGCGAGCAATAACCGTAACATCAGATGGCACACGTCACATATCTGATTGGGTCAACCAAATCTTGAGAATGGGGATATCCAAGCCATTGTGGATCCAAGATTAG 471 0.4161 MAKGNLRNLLSDKNPDILKWNERLQIALDAACGLDYLHNGCKPPIIHRDLKCANILLSENMQAKIADFGLSKAFANDTDTHISTRPAGTFGYLDPEFHRTGNLNKKSDVYSFGIILLELMTGQRAITVTSDGTRHISDWVNQILRMGISKPLWIQD 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0933 156 PANTHER OS07G0107800 PROTEIN-RELATED 1 142 - -
Lele41g0933 156 ProSiteProfiles Protein kinase domain profile. 1 156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0933 156 SUPERFAMILY Protein kinase-like (PK-like) 1 149 IPR011009 -
Lele41g0933 156 SMART serkin_6 1 154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0933 156 FunFam Os07g0541700 protein 1 89 - -
Lele41g0933 156 Pfam Protein tyrosine and serine/threonine kinase 1 126 IPR001245 GO:0004672|GO:0006468
Lele41g0933 156 Gene3D Transferase(Phosphotransferase) domain 1 1 153 - -
Lele41g0933 156 ProSitePatterns Serine/Threonine protein kinases active-site signature. 45 57 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0933 Lele-ChrLele41 18871800 18872629 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0933 1 147 Receptor kinase-like Gene Family AT1G49100 56.757 8.26e-55 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele41g0933 PK_Tyr_Ser-Thr 3.4e-29 CL0016