Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0932 ATGAAGATGGCACCAATATGGATCATGGCTTTGGTTGTATGTGTTTCTTCTATCATCGACCTTCGAAATTCAGCACAAGTTGTTCCATCAGATGCTGGTGATTCTGATACAGGCCGGGGGATAAGCATTGATTGTGGTGTAACTCAAGACATTTGGGATGCAAATCGATTCTTTCATGAGGCAGATGATGCAGAGTTCGTAGAATCTGGCAAAATATATAATAAATATATTGGTCAGCTTAAATCAAAAAGTCAAGGGTTTTCTCAAGCTGAAGTTCTTGGTATTACCAATGACTTTGAAACTGAAATTGGAGGAGGGGGATTTGGAAAAGTGTACCTTGGAAGACTAAACGATGGTACTCAAGTTGCAGTCAAGTTACTTTCTCAGTCATCACAGCAAGGCTTTAATGAGTTTCTATCAGAGGCAAAACTATTATCCATTATGTATCATAGAAATCTTCTTTCTCTTGTTGGCTATTGTGATGATGGGGACATGAAAGCTCTGATTTATGAATACATGGCAATGGGAAATCTCCAGAACCTACTGTCAGATAAGAACCCAAATATTTTGAACTGGAATGAGAGACTTCAAATTGCATTGGATACAGCATGTGGATTGGACTATCTACATAATGGTTGTAAGCCACCAATAATTCACAGAGACCTAAAATCTGCAAACATCTTGCTAAGTGAAAACATGCAAGCCAAGATTGCTGATTTCGGACTGTCTAAAGCGTTTGCCAATGAAACTGACACTCATGTTACAACTCGCCCGGCAGGCACATTTGGTTACATCGACCCTGAATTCCATAGATCTGGAAACTTGAGAAAGAAAAGCGATGTTTATAGTTTTGGGGTAATTCTGCTCGAGCTAATGACTGGCCAACAAGCAATAACCAGAACGTCTGAAGGTACACGGCACATATCTGATTGGGTCAAACCAAAGCTTGAGAATGGGGATATCCAAGCCATTGCGGATCCACGATTAGAAGGAAAATTCAGTAGTTCTTCAGCATGGAAGTTTCTAGAGATAGCCATGTCATGCATTACACCAACAGCAATCCAAAGACCTGATATAAGTTCAGTTGTAATTGATCTAAAGCAGTGTTTGGCTATGGAAACTTCACTTGAAAGTGCAGAAAGCAGCAGTTTAATGTCAAGCACTTCATTATTGGAAACAAGTTATTCCCATTCTGCAGTATCATACTCCCCTCCATCTGCTAGGCTTTGGCAACATATGGGTCACTACTCCTTCAAACCACATATTTCTTATCTTTCCCTCAAAACCGAGGCGGCTCAGCTCTCAACCTGGTTTGCTGCTAATTAA 1326 0.4027 MKMAPIWIMALVVCVSSIIDLRNSAQVVPSDAGDSDTGRGISIDCGVTQDIWDANRFFHEADDAEFVESGKIYNKYIGQLKSKSQGFSQAEVLGITNDFETEIGGGGFGKVYLGRLNDGTQVAVKLLSQSSQQGFNEFLSEAKLLSIMYHRNLLSLVGYCDDGDMKALIYEYMAMGNLQNLLSDKNPNILNWNERLQIALDTACGLDYLHNGCKPPIIHRDLKSANILLSENMQAKIADFGLSKAFANETDTHVTTRPAGTFGYIDPEFHRSGNLRKKSDVYSFGVILLELMTGQQAITRTSEGTRHISDWVKPKLENGDIQAIADPRLEGKFSSSSAWKFLEIAMSCITPTAIQRPDISSVVIDLKQCLAMETSLESAESSSLMSSTSLLETSYSHSAVSYSPPSARLWQHMGHYSFKPHISYLSLKTEAAQLSTWFAAN 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0932 441 ProSiteProfiles Protein kinase domain profile. 97 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0932 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Lele41g0932 441 Gene3D Transferase(Phosphotransferase) domain 1 174 390 - -
Lele41g0932 441 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 173 379 - -
Lele41g0932 441 SMART serkin_6 97 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0932 441 Pfam Protein tyrosine and serine/threonine kinase 99 363 IPR001245 GO:0004672|GO:0006468
Lele41g0932 441 SUPERFAMILY Protein kinase-like (PK-like) 84 366 IPR011009 -
Lele41g0932 441 FunFam receptor-like protein kinase FERONIA 65 172 - -
Lele41g0932 441 Gene3D Phosphorylase Kinase; domain 1 103 173 - -
Lele41g0932 441 ProSitePatterns Protein kinases ATP-binding region signature. 103 125 IPR017441 GO:0005524
Lele41g0932 441 CDD STKc_IRAK 103 368 - -
Lele41g0932 441 PANTHER OS07G0107800 PROTEIN-RELATED 24 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0932 Lele-ChrLele41 18859482 18867101 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0932 82 407 Receptor kinase-like Gene Family AT1G51890 48.624 2.09e-107 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele41g0932 PK_Tyr_Ser-Thr 1.6e-49 CL0016