Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0930 ATGAACAGAGGAAGGATTTCATGCCCTGCTTTTCATATATTTCATAATCTTGTGAATCACTTGCTTTTTCCCACCAGCTATGGAAAATCTGAGAAATAGGGGGCTGCAGCAATATCCGGAGTGACACTGGCATTTACTTTAAAGTTTCAGTTCCATCTTAATATGTGTAAGAAGAAAAAGGAGGGAAATGAGAGGAAAGAGAAGAGTAAGAAAGATGATGAAGAGAGAAGATCAGGAAAGAATCAAGACAAGAAAAAGGAAACTAATGTTAGTGTTAGTGTTAAGCCCAAGATCAATAATGAGGCACAAATCTCAGCATCTAAGAAAAACTGGCAAGAGAATTCAAACAAATACGTATTTTCTTTAAGGGATGTTATTAGAATTACCAATAACTTCAAAACTAAAATTGGAAAAGGAGGATTTGGAGAAGTTTACCTTGGTTCTCTGCAAGATGGGAGAGATGTTGCTGTAAATTTGTTGACTATCGTTCACCATAAAAAGCTGGTTTCTTTTGTGGGGTACTACAACGAACGTGATGTGAAAGCATTGATCTATGAATATATGGCTCAGGGAAATCTGCAAGGGCTTTTGTCAGATAGAAATCCAAGTGTTTTGAAGTGGTCTGAAAGACTTCAAATTGCTGTGAATGTTGCACTTGGATTGTACTATTTGCATAATGGTATTAGGCCACCTGTAGTTCATAGAGACTTGAAGACAACCAATATTTTGTTGAATAAAAAGATGAAAGCCAATATTTCTGACTTTAGACTATGTAGATCCTTCGCAAACGAAAATGATACTCATATGTCAACCACACCGGTTGTGACATTCGGTTATCTTGATCCTGAGTTTCAAAGCACTGGACAGTTGAACAAGAAGAGTGATATCTATAGTTTTAGGGTAATTTTGCTCGAGCTAATCACAGGACTGTGTTTAATAAAAGAAGAGTCACTTACTTTATCGGGTTAA 969 0.3643 MNRGRISCPAFHIFHNLVNHLLFPTSYGKSEKXGAAAISGVTLAFTLKFQFHLNMCKKKKEGNERKEKSKKDDEERRSGKNQDKKKETNVSVSVKPKINNEAQISASKKNWQENSNKYVFSLRDVIRITNNFKTKIGKGGFGEVYLGSLQDGRDVAVNLLTIVHHKKLVSFVGYYNERDVKALIYEYMAQGNLQGLLSDRNPSVLKWSERLQIAVNVALGLYYLHNGIRPPVVHRDLKTTNILLNKKMKANISDFRLCRSFANENDTHMSTTPVVTFGYLDPEFQSTGQLNKKSDIYSFRVILLELITGLCLIKEESLTLSG 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0930 322 MobiDBLite consensus disorder prediction 60 93 - -
Lele41g0930 322 SUPERFAMILY Protein kinase-like (PK-like) 111 316 IPR011009 -
Lele41g0930 322 Pfam Protein tyrosine and serine/threonine kinase 158 308 IPR001245 GO:0004672|GO:0006468
Lele41g0930 322 Gene3D Transferase(Phosphotransferase) domain 1 189 320 - -
Lele41g0930 322 MobiDBLite consensus disorder prediction 60 91 - -
Lele41g0930 322 FunFam Os07g0541700 protein 188 277 - -
Lele41g0930 322 Gene3D Phosphorylase Kinase; domain 1 101 159 - -
Lele41g0930 322 PANTHER OS07G0107800 PROTEIN-RELATED 54 314 - -
Lele41g0930 322 SMART serkin_6 130 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0930 322 Gene3D Phosphorylase Kinase; domain 1 160 188 - -
Lele41g0930 322 ProSiteProfiles Protein kinase domain profile. 130 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0930 322 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0930 Lele-ChrLele41 18849525 18855363 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0930 115 309 Receptor kinase-like Gene Family AT4G29180 48.230 7.57e-61 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele41g0930 PK_Tyr_Ser-Thr 6e-31 CL0016