Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0929 ATGGGAAGGGAACCAAAGTTGAATTTGTTTCTAGGGTTGTGTCTCGTTTTCATCAAACTTCTCTTTCATGTTGGCAGTTCAGTGGGAGATGGGAGAAAACTCATCACTAACGACAATAATCCTGATAATCCTGGCCTTTGTCTGGTGGATTCATGCAAAAAGCATAAGTTTGTTATCCCACTTGTTGCTTCTATTTCTGCTTTTGTTGTAAGCGCCTTGGTTTGTTTAGGAATATGGATCTTCAAAACCAAAAAGTTAAAAGTGGTTATCACTGTTTCTACGAATGAAGAATCGTTGCGACCAAAAAATCGAGCAGTTTCTTACTCCAGAATTCTCAGAATCACTAATAATTTGCAAGACTTAATTGGAGAAGGAGGTTTTGGGAATGTTTATTATGGCACTCTAAGGGATAATACTCAAGTTGCTGTGAAGCTACTTTCTCAATCATCAATGCAAGGTTTCAAAGAATTTCGATCAGAGGTAGAACTCTTGATGGTTATTCATCACAGACATTTGGTTTCTCTCATTGGCTACTGTGAAGAAGGAAGTGTGAGGGCTTTAATTTATGAATATATGGCTAATGGCAATCTCCAACAGCATTTATCAGTGGAGAACCCAAATGTTTTGAAATGGAATGAGAGGCTTCAAATTGCTTTGGATGCCGCAAAAGGATTGGACTATTTGCATAATGGTTGTAAACCACCAATAGTCCATAGAGATTTAAAAACTTCCAACATTTTACTAAATGAAAAGATGCAAGCCAAGATTTCTGACTTTGGACTATCTCGAGCTTTTGCAAATGATATAGATACTCATGTATCAACTCGTCCTGCTGGCACATTAGGTTATCTTGATCCTGAATTTCAGAGTTCTGGGAACCTGAATAAAAAGAGTGATGTTTATAGTTTTGGGATAATTCTACTTGAGCTAATCACGGGTCAACCAGCAATAAGGAGAGAAAATGGGGCCATTTTCCACATTCTTCATTGGGTTACTCCAAAACTTGAAATGGGGGATATCCAATCAATCATTGATCCCAGGTTAGAAGGAAGTTGCAGCACCAATTCAGCTTGGAAATTGTTAGAGATAGCTATGTCTTGCACTCCACCATCTGCAGTTCAAAGGCCTGACATCAGCCATGTAGTATCCGAACTAAAGGAATGTCTGGCTCTAACACAAAGCATGGGGACGATTTCAACCAGTTCCTTGGATAGGCGATCTTTCAGTTCTGATTCAGGCCTTATTCCATATGCTCGGTAG 1260 0.3905 MGREPKLNLFLGLCLVFIKLLFHVGSSVGDGRKLITNDNNPDNPGLCLVDSCKKHKFVIPLVASISAFVVSALVCLGIWIFKTKKLKVVITVSTNEESLRPKNRAVSYSRILRITNNLQDLIGEGGFGNVYYGTLRDNTQVAVKLLSQSSMQGFKEFRSEVELLMVIHHRHLVSLIGYCEEGSVRALIYEYMANGNLQQHLSVENPNVLKWNERLQIALDAAKGLDYLHNGCKPPIVHRDLKTSNILLNEKMQAKISDFGLSRAFANDIDTHVSTRPAGTLGYLDPEFQSSGNLNKKSDVYSFGIILLELITGQPAIRRENGAIFHILHWVTPKLEMGDIQSIIDPRLEGSCSTNSAWKLLEIAMSCTPPSAVQRPDISHVVSELKECLALTQSMGTISTSSLDRRSFSSDSGLIPYAR 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0929 419 Gene3D Phosphorylase Kinase; domain 1 122 192 - -
Lele41g0929 419 ProSiteProfiles Protein kinase domain profile. 116 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0929 419 Pfam Protein tyrosine and serine/threonine kinase 118 385 IPR001245 GO:0004672|GO:0006468
Lele41g0929 419 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 192 397 - -
Lele41g0929 419 SUPERFAMILY Protein kinase-like (PK-like) 101 385 IPR011009 -
Lele41g0929 419 ProSitePatterns Protein kinases ATP-binding region signature. 122 144 IPR017441 GO:0005524
Lele41g0929 419 FunFam Leucine-rich repeat receptor-like protein kinase 93 191 - -
Lele41g0929 419 PANTHER OS07G0107800 PROTEIN-RELATED 36 393 - -
Lele41g0929 419 Gene3D Transferase(Phosphotransferase) domain 1 193 404 - -
Lele41g0929 419 CDD STKc_IRAK 122 387 - -
Lele41g0929 419 SMART serkin_6 116 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0929 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0929 Lele-ChrLele41 18825829 18830944 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0929 43 419 Receptor kinase-like Gene Family AT2G19210 48.320 1.40e-120 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele41g0929 PK_Tyr_Ser-Thr 3.8e-51 CL0016