Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0927 ATGCAAAAAGCATACGTAGAACTTTTGATGGTTGTTCATCATAGACATTTGGTTTCTCTGATTGGATATTGCAAAGAAAGTGGTGCGAGGGCATTGATATATGAGTATATGGCCAATGGTGATCTCCGCCGACATTTGTCGGAAATCCAGTCCATTGTTGATCCGAGGTTACGAGGAAAATATAGTGTTGATTCGGCTTGGAAATTTCTAGAGGTAGCCATGGCATGCACTGCACCATCTGCAAATCAAAGGCCTGATATAAGTAAAGTTGTTTATGAACTACGGGAATGTTTGGCAATGGATACAATCTTGGAAGTGACCACCAGCAGCAGCTACCACCCCAATTCAAGCAGTTCCACAAATATGAGTGTTGCGCAGTTTAATTCAGACTTCAGTTCTCTGTCTGCAAGATAG 414 0.4203 MQKAYVELLMVVHHRHLVSLIGYCKESGARALIYEYMANGDLRRHLSEIQSIVDPRLRGKYSVDSAWKFLEVAMACTAPSANQRPDISKVVYELRECLAMDTILEVTTSSSYHPNSSSSTNMSVAQFNSDFSSLSAR 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0927 137 Gene3D Phosphorylase Kinase; domain 1 2 38 - -
Lele41g0927 137 PANTHER OS07G0107800 PROTEIN-RELATED 3 44 - -
Lele41g0927 137 SUPERFAMILY Protein kinase-like (PK-like) 6 64 IPR011009 -
Lele41g0927 137 Coils Coil 136 137 - -
Lele41g0927 137 Pfam Protein tyrosine and serine/threonine kinase 6 50 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0927 Lele-ChrLele41 18806843 18808781 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0927 3 79 Receptor kinase-like Gene Family AT2G28970 48.101 7.18e-17 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele41g0927 PK_Tyr_Ser-Thr 9.5e-07 CL0016