Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0926 ATGGAAGGAAACTCACCGCCTCGGGTAAGCGCCTTAAGTTTATACCAAACAGATGTGGATGCTATCTTGGACATCAAAATCACATACAAAATCTCCAAGTTGGATTGGCAAGGTGACCCATGTTTTCCCAATTATGAATGGGAGGGATTTATTTGCAGTTCTAGCACCACTCACTCTTACGCAAGGATCACCTCATTAAACTTGAGCATGAGCAAGTTAAAAGGAGACATAGCTATTTCATTCTCACGGCTTACGGAGTTAGAGTCCCTGTATTTGTCAGATAACAACTTATCAGGAACAATACCAGAATTTCTAGCTGAATTGCCAAATAATTTGAGAGGCAACAAGCTTACTGGTTCAATTCCCAAGGCTCTAAAGGAGAAGTCAGATTTGGAAATGAGTTTGGATGGTAACCCTGATCTTTGCTTGACGGATCCATGCAGAAAGCATAAGTTCGTTATCCCACTAATAGCATCTGTTTCTTCTTTGGTGGTTGTAATCTTCTTGGTTTCACTTGGAATATGGATCTTTAGAATTAAAATACTAAAAGGTTTGCACAAGATTCCCATGAACCTTCCGCTTTATTATTATGTCTTAGCAACTTTAAATTCTATGCCGAGGGTTTATCTAGGCACTCTTAAGAATGATATTCAAGTTGCAGTAAAATTACTTTCTCAATCATCGGTACAAGGTCAGAGAGAATTTCGATCAGAGGTAGAACTTTTGATGGTTGTTCATCATAGACATTTTGTTTCTCTGATTGGATATTGCGAAGGAAGTGGTGTGCGGGCATTGATATATGAGTATATGGCCAATGGTGATCTCCGCCGACATTTGTCGGGTATGAAATCTCACAGAGCAATTATGCATTTTCTAGCCACAATATGGTTTCAAAGTTCTGGCAATCTTACAAAAGGAAGCGATATATATAGTTTTGGTATAATTCTGCTAGAGCTAATCTCTGGACAACCAGCAGCGAAAAGGCAACAAAACTATACCTTCAGTCTCCTACTTCAATGGGTTGCCCCTAAAGTAGCCATGGCATGCACTGCACCATCTGCAAATCAAAGGCCTGATATAAGTAAAGTTGTTTATGAACTACGGGAATGTTTGGCAATGGAGACAAGCTTGGAAGTGAACACCACCAGCAGCGACCACCCCAATTCAAGCAGTTCCACAAATATGAGTGTTTCGCAATTTGATTCAGATTTCAGTGCTCTGTCTGCAAGATAG 1233 0.4006 MEGNSPPRVSALSLYQTDVDAILDIKITYKISKLDWQGDPCFPNYEWEGFICSSSTTHSYARITSLNLSMSKLKGDIAISFSRLTELESLYLSDNNLSGTIPEFLAELPNNLRGNKLTGSIPKALKEKSDLEMSLDGNPDLCLTDPCRKHKFVIPLIASVSSLVVVIFLVSLGIWIFRIKILKGLHKIPMNLPLYYYVLATLNSMPRVYLGTLKNDIQVAVKLLSQSSVQGQREFRSEVELLMVVHHRHFVSLIGYCEGSGVRALIYEYMANGDLRRHLSGMKSHRAIMHFLATIWFQSSGNLTKGSDIYSFGIILLELISGQPAAKRQQNYTFSLLLQWVAPKVAMACTAPSANQRPDISKVVYELRECLAMETSLEVNTTSSDHPNSSSSTNMSVSQFDSDFSALSAR 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0926 410 SUPERFAMILY Protein kinase-like (PK-like) 207 377 IPR011009 -
Lele41g0926 410 Gene3D Phosphorylase Kinase; domain 1 204 270 - -
Lele41g0926 410 Gene3D Transferase(Phosphotransferase) domain 1 271 393 - -
Lele41g0926 410 Pfam Protein tyrosine and serine/threonine kinase 207 293 IPR001245 GO:0004672|GO:0006468
Lele41g0926 410 PANTHER OS07G0107800 PROTEIN-RELATED 12 376 - -
Lele41g0926 410 MobiDBLite consensus disorder prediction 378 410 - -
Lele41g0926 410 FunFam Leucine-rich repeat receptor-like kinase 17 144 - -
Lele41g0926 410 SUPERFAMILY L domain-like 59 159 - -
Lele41g0926 410 Gene3D Ribonuclease Inhibitor 20 144 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0926 Lele-ChrLele41 18777800 18782756 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0926 6 283 Receptor kinase-like Gene Family AT2G28970 40.426 2.19e-62 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele41g0926 PK_Tyr_Ser-Thr 2.6e-12 CL0016