Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0924 ATGCAAGGTTTCAAAGAATTTCGATCAGAGGTAGAACTCTTGATGGTTATTCATCACAGACATTTGGTTTCTCTTATTGGCTACTGTGAAGAAGGAAGTGTGAGGGCTTTAATTTATGAATACATGGCTAATGGCAATCTCCAACAGCATTTATCAGTGGATAACCCTAATGTTTTGAAATGGAATGAGAGGCTTCAAATTGCATTGGATGCCGCACAAGGATTGGACTATTTGCATAATGGTTGTAAACCACCAATTGTCCATAGAGATTTAAAAACTTCCAACATTTTACTAAATGAGAAGATGCAAGCCAAAATTTCTGACTTTGGACTATCTCGAGCTTTTGCAAATGATATTGACACTCATGTATCAACTCGTCCTGCTGGCACGTTAGGTTATCTTGATCCCGAATTTCAGAGTTCTGGGAACCTGAATAAAAAAAGTGATGTTTATAGTTTTGGGATAATTTTACTTGAGCTAATCACGGGTCAACCAGCAATAAGGAGAGAAAATGGGGCCATTTGCCACATTCTTCATTGGGTTACTCCATTACTTGAAATGGGGGATATCCAATCAATCATTGATCCAAGGTTAGAAGGAAGTTGCAGCACCAATTCAGCTTGGAAATTGTTAGAGATAGCTATGTCTTGCACTCCACCATCCGCAGTTCAAAGGCCTGACATCAGCCATGTGGTATCCGAACTAAAGGAATGTCTGGCTCTAACACAAAGCATGGGGACGATTTCAACCAGTTCCTTGGATAGGCGTTCTTTCAGATCTGATTCAGGCCTTATTCCATATGCTCGGTAG 810 0.4012 MQGFKEFRSEVELLMVIHHRHLVSLIGYCEEGSVRALIYEYMANGNLQQHLSVDNPNVLKWNERLQIALDAAQGLDYLHNGCKPPIVHRDLKTSNILLNEKMQAKISDFGLSRAFANDIDTHVSTRPAGTLGYLDPEFQSSGNLNKKSDVYSFGIILLELITGQPAIRRENGAICHILHWVTPLLEMGDIQSIIDPRLEGSCSTNSAWKLLEIAMSCTPPSAVQRPDISHVVSELKECLALTQSMGTISTSSLDRRSFRSDSGLIPYAR 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0924 269 ProSitePatterns Serine/Threonine protein kinases active-site signature. 86 98 IPR008271 GO:0004672|GO:0006468
Lele41g0924 269 Gene3D Transferase(Phosphotransferase) domain 1 43 255 - -
Lele41g0924 269 Gene3D Phosphorylase Kinase; domain 1 1 42 - -
Lele41g0924 269 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 42 247 - -
Lele41g0924 269 Pfam Protein tyrosine and serine/threonine kinase 5 235 IPR001245 GO:0004672|GO:0006468
Lele41g0924 269 PANTHER OS07G0107800 PROTEIN-RELATED 2 243 - -
Lele41g0924 269 SUPERFAMILY Protein kinase-like (PK-like) 3 235 IPR011009 -
Lele41g0924 269 ProSiteProfiles Protein kinase domain profile. 1 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0924 269 SMART serkin_6 1 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0924 Lele-ChrLele41 18746886 18748081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0924 2 269 Receptor kinase-like Gene Family AT1G51860 54.380 6.41e-98 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele41g0924 PK_Tyr_Ser-Thr 2.3e-41 CL0016