Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0923 ATGTTGTTGTTCTGCTGTGCATATATGCATGTTTTGAATTGCAGGAACCTAAGCTCAAGCAAATTAACAGGACAGATAGCTACTTCATTTGCCAATCTGAAAACCTTGGAGTCCCTAGATTTGTCAAATAATGAATTGATTGGACAAGTACCAGCATTTCTTGCTGATCTTCCTAATTTGAAAGTCCTTAATTTGACTGGAAACAAGCTCACAGGTTCAATTCCAAAGGCTTTGAGGGAAAAGGCTGATTTGCAGCTAAGTGTAGCCAGAAATCCAGGCCTCTGTCAGAAAGATTCATGCAAAGAAAACAAGTTTGTAATTCCTCTTGTGGCATCATTAGCAGTTTTGGTCCTAATTATCATTCTTTCTCTGATGATTTGGAGACTCAGAAAGAAAAGACAAGTTTTGTCTACCAAATCTCGAAAGATGGGAATTCTAAAACAAAAGAATCGAGAATTTTCTTACTCACAAGTTCTCCGTATCACCGACAATTTCAAAACTATTATAGGAGAAGGAGGATTTGGGAAAGTTTATCTTGGTACTTTAGAAGATGATGTTACTCAAGTTGCAGTAAAATTACTTTCTCCATCATCAAAGCAGGGGTACAAGGAATTTGAATCAGAGGCTCAACTCTTATCGGTTATTCATCACAGAAACTTGGTTTCACTCATTGGATATTGTCATGAAAATGACATAAAAGCATTGATTTATGAATACATGGATAATGGGGACCTCGGCCAGCTATTATCAGAGAAAAACCCAAATGTTTTGAAGTGGAATGAGAGACTTCAAGTTGCAACTGATGCAGCAAAAGGATTGGAATATCTTCATAATGGTTGTAAGACTCCTATAATTCATAGAGACTTGAAGCCATCCAACATTTTATTACATAAATCTAAGCTAGCCAAGATTGCTGATTTTGGACTCTCTAGAGCATTCACAAATGAAATCGACTCGCATCTATCAACTCAACCTGCTGGTACACCTGGTTATATTGATCCTGAATTTCAAAGATCTGGAAACCTAAATAAGAAAAGTGATATTTATAGTTTTGGGATGATTCTCCTTCAATTGATAACTGGTCATCCTCCGATAAAGAAAGGACCTGAGAATATTAGTTTCATTCTTGACTGGGTTCAACCTAAAATTGAATGCGGGGATATTGAGGGAATTGTTGATCCAACATTGGCTGGAGAATTTGGGGTTTCATCAACATGGAAAGCTGTTGAAGTAGCCATGTCATGTATCTTACCAACTCCAACCCAAAGGCCAGAAATAAGTTACGTGTTGCAAGAACTGCAAGAATGTTTGGCTTTGGAGATGGATCATCCAAGAATCAATACCACAACAAGTGATTCCCTCCATCATACTGTGAACTGTGAATCAATCACTATTCTCTCTGCTAGGTAG 1410 0.3752 MLLFCCAYMHVLNCRNLSSSKLTGQIATSFANLKTLESLDLSNNELIGQVPAFLADLPNLKVLNLTGNKLTGSIPKALREKADLQLSVARNPGLCQKDSCKENKFVIPLVASLAVLVLIIILSLMIWRLRKKRQVLSTKSRKMGILKQKNREFSYSQVLRITDNFKTIIGEGGFGKVYLGTLEDDVTQVAVKLLSPSSKQGYKEFESEAQLLSVIHHRNLVSLIGYCHENDIKALIYEYMDNGDLGQLLSEKNPNVLKWNERLQVATDAAKGLEYLHNGCKTPIIHRDLKPSNILLHKSKLAKIADFGLSRAFTNEIDSHLSTQPAGTPGYIDPEFQRSGNLNKKSDIYSFGMILLQLITGHPPIKKGPENISFILDWVQPKIECGDIEGIVDPTLAGEFGVSSTWKAVEVAMSCILPTPTQRPEISYVLQELQECLALEMDHPRINTTTSDSLHHTVNCESITILSAR 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0923 469 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 240 445 - -
Lele41g0923 469 SUPERFAMILY L domain-like 16 85 - -
Lele41g0923 469 FunFam Leucine-rich repeat receptor-like kinase 2 97 - -
Lele41g0923 469 SMART serkin_6 163 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0923 469 PANTHER OS07G0107800 PROTEIN-RELATED 16 437 - -
Lele41g0923 469 ProSiteProfiles Protein kinase domain profile. 163 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0923 469 FunFam Leucine-rich repeat receptor-like protein kinase 141 239 - -
Lele41g0923 469 Gene3D Transferase(Phosphotransferase) domain 1 240 456 - -
Lele41g0923 469 Gene3D Phosphorylase Kinase; domain 1 150 239 - -
Lele41g0923 469 Pfam Leucine rich repeat 16 70 IPR001611 GO:0005515
Lele41g0923 469 ProSitePatterns Protein kinases ATP-binding region signature. 169 192 IPR017441 GO:0005524
Lele41g0923 469 PRINTS Leucine-rich repeat signature 36 49 - -
Lele41g0923 469 PRINTS Leucine-rich repeat signature 57 70 - -
Lele41g0923 469 ProSitePatterns Serine/Threonine protein kinases active-site signature. 284 296 IPR008271 GO:0004672|GO:0006468
Lele41g0923 469 CDD STKc_IRAK 169 435 - -
Lele41g0923 469 Gene3D Ribonuclease Inhibitor 4 105 IPR032675 -
Lele41g0923 469 SUPERFAMILY Protein kinase-like (PK-like) 145 433 IPR011009 -
Lele41g0923 469 Pfam Protein kinase domain 166 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0923 Lele-ChrLele41 18723693 18727509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0923 16 437 Receptor kinase-like Gene Family AT2G19230 50.580 2.85e-136 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele41g0923 Pkinase 9.6e-48 CL0016