Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele41g0916 | ATGATTTTTTCCTGGAGACCTCACTTGTATTTGCTTCACTTTCTTCTCTTCGTTCTTCACCTCCACTCCCTTTCTTCGGACACACCACCCTTGGATTGTAAGGACACAACTCGCGTCTGCACTTCTTTCTTGGCCTTTAAGCCTCAACCAAATCAAACCTTAGACTTAGTTCAGAGCATGTTTGATGTATTGCCTAAAGACATTACCATTGAAGGCAACGACCGGGACTACATATTCATAAAAAAGAACTGTTCTTGTGCTGCTGGTACAAACAAATACGTATCCAGCACCACTTATACTGTAAAATCCAATCAAGGGTTGGTGTATGATTTAGTGATGAAGGCTTATGATGGGCTTGGCTTCTTGCCCAAAACAACCAGGAGGGCAGAAAACGGCGCCGTTACAACATTGAAGTTGTTTTGTGGTTGCTCCAGTGGACCCTGGAACTATATGATGACTTATGTGATGAGAGAACGTGATAGCATTGAATCTCTTGCGAGTCGGTTTGGAGTTAGTATGGATAGTATAGAGACAGTAAATGGCATCAACAATCCTGATAATATCACTGTGGGTTCGCTGTATTATATACCTCTTAATTCGGTTCCTGGTGAGCCATATACCCAGAAGAATGATACTTCTGCAGCTCCTGTTCCTGCCCCTTCTATTGACAATGCTTCTGCCAGTCAAGTCAGTCATGCTCATGCACCCTATGTATGGATCGTTGGGGGTTTAGGAATTGGTCTTGTCCTGATAATATTAAGCATAATTCTTTATTTCTGTGTGAGATCGTCCAATTGTTTTGCTGAAGCAAGCACAAGTCATGAAAAAGATGTTGAAGGCAAGATCTCTCACAAATTTCAAATCCTTCAAAATCCAAGTTTTTGCTGTGGTTCAGGAAGGTACGTACAGGGCAAACCCGTAGAACAGAGGCAATCCGATCGTGAATCCAACAACAACCAAATTACTGCTCCCAAAGTTTCAACTTTGGGGATTGATGTCTTTGAAGTGGAGAACACTGTTGTCTTCACATACGAAGAGATTTTTTCTGCAACTGTTGATTTCTCTGATTCAAATCTACTTGGGCATGGTATTTATGGTTCTGTTTATTATGGCTTCCTTCGTGACCAGGAGGTTGCTATTAAAAGAATGACTGCTACAAAAACTAAAGAATTCTTGTCAGAGATGAAGGTCCTAGGCAAGGTTCATCATGCAAATCTGGTAGAATTGATCGGCTATGCTGCTAGTCATGATGAACTTTACCTTATTTATGAATACGCCCAGAAGGGTTCACTTGGAAGCCATTTGCATGATCAACTGAGTAAGGGTTCTTCCTCACTCTCTTGGATCATGAGGGTCCAGATAGCACTTGATGCTGCTAGGGGTCTTGAGTACATACATGAGCACACCAAAACCAATTATGTCCATAGAGATATCAAGACAAGCAACATCTTACTTGATGCTTCCTTCAGAGCAAAGATTTCAGATTTTGGGTTAGCAAAACTAATTGGGAAAGCAAATGAAGAAGAAATTAGTGCCACCAAAGTTGTTGGCACATATGGTTATCTTGCACCAGAATACTTGAGTGATGGCCGTGCAACGACCAAAAGTGATGTCTATGCATTTGGCATTGTTCTTTTTGAGATAATATCAGGGAAGGAGGCCACTATTCGGGCAAAAGGCAAAATGTCAAAAAATCCTGAGAGACGTTCTCTTGTATCTATTATGTTGGCAGCTCTTAGGGACTCACCTGATTCAATGAGTATGTCTTGTTTGAGAAATCATATTGATCCTAATATGATGGACTTGTATCCCCATGATTGTGTATTTAAGATGGCTATGCTGGCAAAGCAATGTGTGGATGATGATCCCATCTTACGACCTGATATGCAGCAAGTTGTTATTTCGCTCTCACAGATCCTACTGTCTTCTATTGAGTGGGAAGCTACTCTAGCAGGGAACAGCCAAGTATTCAGTGGCCTTGCTCAAGGAAGATAG | 1995 | 0.4145 | MIFSWRPHLYLLHFLLFVLHLHSLSSDTPPLDCKDTTRVCTSFLAFKPQPNQTLDLVQSMFDVLPKDITIEGNDRDYIFIKKNCSCAAGTNKYVSSTTYTVKSNQGLVYDLVMKAYDGLGFLPKTTRRAENGAVTTLKLFCGCSSGPWNYMMTYVMRERDSIESLASRFGVSMDSIETVNGINNPDNITVGSLYYIPLNSVPGEPYTQKNDTSAAPVPAPSIDNASASQVSHAHAPYVWIVGGLGIGLVLIILSIILYFCVRSSNCFAEASTSHEKDVEGKISHKFQILQNPSFCCGSGRYVQGKPVEQRQSDRESNNNQITAPKVSTLGIDVFEVENTVVFTYEEIFSATVDFSDSNLLGHGIYGSVYYGFLRDQEVAIKRMTATKTKEFLSEMKVLGKVHHANLVELIGYAASHDELYLIYEYAQKGSLGSHLHDQLSKGSSSLSWIMRVQIALDAARGLEYIHEHTKTNYVHRDIKTSNILLDASFRAKISDFGLAKLIGKANEEEISATKVVGTYGYLAPEYLSDGRATTKSDVYAFGIVLFEIISGKEATIRAKGKMSKNPERRSLVSIMLAALRDSPDSMSMSCLRNHIDPNMMDLYPHDCVFKMAMLAKQCVDDDPILRPDMQQVVISLSQILLSSIEWEATLAGNSQVFSGLAQGR | 664 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele41g0916 | 664 | SMART | serkin_6 | 354 | 591 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lele41g0916 | 664 | Gene3D | Transferase(Phosphotransferase) domain 1 | 427 | 650 | - | - | |
Lele41g0916 | 664 | FunFam | PTI1-like tyrosine-protein kinase 3 | 426 | 650 | - | - | |
Lele41g0916 | 664 | ProSitePatterns | Protein kinases ATP-binding region signature. | 360 | 381 | IPR017441 | GO:0005524 | |
Lele41g0916 | 664 | SUPERFAMILY | LysM domain | 152 | 197 | IPR036779 | - | |
Lele41g0916 | 664 | SUPERFAMILY | Protein kinase-like (PK-like) | 333 | 636 | IPR011009 | - | |
Lele41g0916 | 664 | ProSiteProfiles | Protein kinase domain profile. | 354 | 641 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lele41g0916 | 664 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 473 | 485 | IPR008271 | GO:0004672|GO:0006468 | |
Lele41g0916 | 664 | CDD | LysM | 153 | 196 | IPR018392 | - | |
Lele41g0916 | 664 | Pfam | LysM domain | 154 | 192 | IPR018392 | - | |
Lele41g0916 | 664 | Gene3D | LysM domain | 147 | 207 | IPR036779 | - | |
Lele41g0916 | 664 | PANTHER | CHITIN ELICITOR RECEPTOR KINASE 1-RELATED | 59 | 658 | IPR044812 | GO:0019199|GO:0045087 | |
Lele41g0916 | 664 | FunFam | Kinase family protein | 329 | 425 | - | - | |
Lele41g0916 | 664 | Pfam | Protein tyrosine and serine/threonine kinase | 358 | 634 | IPR001245 | GO:0004672|GO:0006468 | |
Lele41g0916 | 664 | SMART | LysM_2 | 153 | 197 | IPR018392 | - | |
Lele41g0916 | 664 | ProSiteProfiles | LysM domain profile. | 152 | 196 | IPR018392 | - | |
Lele41g0916 | 664 | CDD | STKc_IRAK | 360 | 639 | - | - | |
Lele41g0916 | 664 | Gene3D | Phosphorylase Kinase; domain 1 | 329 | 425 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele41g0916 | Lele-ChrLele41 | 18656620 | 18661589 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele41g0916 | 30 | 664 | Receptor kinase-like Gene Family | AT1G51940 | 65.379 | 0.0 | 791 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LysM | Lele41g0916 | PK_Tyr_Ser-Thr | 4.3e-50 | CL0016 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele41g0916 | 41 | 18656620 | 18661589 | Lele43g0492 | 43 | 4475585 | 4480532 | hybridization | |
Lele41g0916 | 41 | 18656620 | 18661589 | Lele44g0461 | 44 | 3481387 | 3486212 | hybridization |