Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0897 ATGGCGTCATCCCATCATATCTGCACTCTCACGACCATCTTGTTGGTTTCCTCCATGAATGCTTCAGTCGAATCTGCAACACAATTCAAAGTCGTGTTTGAGTACAAGAATGACTCAGTTGTGAGTTTGGACAAATGGGATTATTATCACTGTGACGCGAGTGATCCAATCACCATCTTCAACAATAGGAATAGCACTATCAACCTGGAGCAGCCTGGTTCATTTTACTTCATCAGTGGGATTTATGAACATTGTATGAATGGCCAGAAATTGATGCTTCAAGTTATATCTCCAATGTCTGCTTCTGCTCCTTCACCTTCTCATCATCATCTTCTTCTTCATCATCATAGCTCTGCGCCTTCATCATCACTTTCAGTGCTTCGATCTCTCAGCACTTGCTTTTCCTTCATGTTCTTCATTATTGCTTCAGGTGTCTCTTCTGTCTAG 447 0.4183 MASSHHICTLTTILLVSSMNASVESATQFKVVFEYKNDSVVSLDKWDYYHCDASDPITIFNNRNSTINLEQPGSFYFISGIYEHCMNGQKLMLQVISPMSASAPSPSHHHLLLHHHSSAPSSSLSVLRSLSTCFSFMFFIIASGVSSV 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0897 148 Pfam Plastocyanin-like domain 31 89 IPR003245 GO:0009055
Lele41g0897 148 PANTHER BLUE COPPER PROTEIN 31 106 IPR039391 GO:0009055
Lele41g0897 148 SUPERFAMILY Cupredoxins 31 96 IPR008972 -
Lele41g0897 148 Gene3D - 15 96 IPR008972 -
Lele41g0897 148 ProSiteProfiles Phytocyanin domain profile. 1 97 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0897 Lele-ChrLele41 18508118 18508909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0897 33 96 Phytocyanin Superfamily AT1G79800 56.250 5.02e-24 90.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0897 41 18508118 18508909 Lele43g0507 43 4611157 4611805 hybridization
Lele41g0897 41 18508118 18508909 Lele44g0474 44 3632629 3633277 hybridization