Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0895 ATGACACTACTTCTCAATGAATCTGCTTCCTCCTCTGAAACTTGTTCTTCTTCCTCCTCTGAATCCAAATCTCACACCGCCAGACCCACCAAAAGACGTCGAACCTCTTCTTCTTCTTCGTCTTCTTCATCTTCTTCTTCTTCTGATTATTCCGGCAAGCTACCGAACTACCGTGGCGTCAGAATGCGAAGCTGGGGTAAATGGGTGTCTGAAATTCGCGAGCCTCGCAAGAAGTCTCGCATCTGGCTCGGCACTTTCGCCACTCCAGAAATGGCCGGTCGAGCCCACGACGTCGCCGCTCTGACCATCAAAGGCAAATCCGCCATTCTCAACTTCCCTCAAATCGCCGCCCTCCTTCCCAGACCCGCCACGTGCTCCCCACGTGACATCCAAACCGCAGCTTCCGCCGCCGCAGCCATGGTCCAGTTCGACACCGTGCAGCCCTCAGAGGCGTCCAGGTCGGAGTCGGAGTCGACGAAGTCTTCCGAGCTGAGCGAAATAGTGGAATTGCCAAACATAGAAGAAGAGAGCTTCCACTCGGGCGAGTTCATAAGGATAGACTCGGCGGATAGCTGGATGTTTCCAGGTATGGGTATGGGTTCGGATGATTCGGAACTGAGCTCCATTTTCTGCCAGCAATATTTCTCAGAGGAGACACCCCTCTGGGATTAA 672 0.5357 MTLLLNESASSSETCSSSSSESKSHTARPTKRRRTSSSSSSSSSSSSSDYSGKLPNYRGVRMRSWGKWVSEIREPRKKSRIWLGTFATPEMAGRAHDVAALTIKGKSAILNFPQIAALLPRPATCSPRDIQTAASAAAAMVQFDTVQPSEASRSESESTKSSELSEIVELPNIEEESFHSGEFIRIDSADSWMFPGMGMGSDDSELSSIFCQQYFSEETPLWD 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0895 223 ProSiteProfiles AP2/ERF domain profile. 56 113 IPR001471 GO:0003700|GO:0006355
Lele41g0895 223 SMART rav1_2 56 119 IPR001471 GO:0003700|GO:0006355
Lele41g0895 223 SUPERFAMILY DNA-binding domain 56 113 IPR016177 GO:0003677
Lele41g0895 223 Pfam AP2 domain 55 105 IPR001471 GO:0003700|GO:0006355
Lele41g0895 223 Gene3D AP2/ERF domain 56 115 IPR036955 GO:0003700|GO:0006355
Lele41g0895 223 MobiDBLite consensus disorder prediction 1 24 - -
Lele41g0895 223 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 36 179 - -
Lele41g0895 223 FunFam Ethylene-responsive transcription factor 2 56 114 - -
Lele41g0895 223 MobiDBLite consensus disorder prediction 1 53 - -
Lele41g0895 223 MobiDBLite consensus disorder prediction 33 53 - -
Lele41g0895 223 MobiDBLite consensus disorder prediction 146 165 - -
Lele41g0895 223 PRINTS Ethylene responsive element binding protein signature 79 95 IPR001471 GO:0003700|GO:0006355
Lele41g0895 223 PRINTS Ethylene responsive element binding protein signature 57 68 IPR001471 GO:0003700|GO:0006355
Lele41g0895 223 CDD AP2 55 113 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0895 Lele-ChrLele41 18493139 18493810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0895 40 194 AP2-EREBP Transcription Factor Family AT4G32800 49.462 9.75e-51 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele41g0895 AP2 1.1e-12 CL0081