Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0884 ATGATCATGGCCGGAAACCCTAACTGGTGGAGCATGCATCCACCAACTTTGATCCCTCCCCAGTTTGTTCTTGGATCTTCCTCAATTCCCATGAATTTCTTCACTGAAACCCAAGAAACTCCTCAGTCATGGAGCCAGATGCTTTTCGCAGGGTTTCCTGGAGAAGAAGATAGAATGGGGTCGTCGAATCATTTTGATGAAAGCAAGAAGATGGAAAATTGGGAAGAACAGATTCTGGATAATAATAATAATAACAATCCATCTTCTAGAGCATCATCAGTTCCACCTTCTGTTGTTGATGTAATGAAGCAAGAAGTTTCCCAAAGTGGTAATAACTTGTACGGCCATGGAAGTGACGAGTTTCATCATCAGGCTTCAGGATCTTATAATTGGTTAAACAATATGATGCCTCCACCAGTAATTCCTTTTACTAATATTTCTTCCCCTAATAATAAGTCTCGTACTAGTAACACTAATATTTTGGATTTCACTTATAACAACAAGCCAGATCATAACCATAGTAATCAACTCCAGCATAACTCTTCATCATCTCAGAGTAATAATAGCTCAGTTTCTTCTGGAGTCTGTAACAAGAAGGCTAGGTTTCAGGCATCTTCAAGCCAGCCTCCTCTCAAGGTGAGAAAGGAGAAACTCGGCGATAGAATAACAACGCTTCACCAGCTAGTTTCCCCATTTGGGAAGACTGACACAGCTTCTGTCTTGTTAGAAGCCATTGGATATATTAGATTCCTCCAAGGTCAAATTGAGGCACTAAGCTCGCCTTACTTATCGAATGCATGGAAGAACATTAGGAATCAACAGCACCCTGTACATGGAGAAAGGAATTCTGTGTTCCCTGAGGACCCGGGTCAGCTGTTGAATGACACTGGCCTCAAAAGAAAAGGAGCTCCAAACCAGGAAGGAGAAGGAAAGGCAAAGGACTTGAGGAGTAGAGGGCTATGCTTGGTGCCAGTGTCTTGCACTCAACATGTTGGCAATGAAAATGGAGCTGACTACTGGGCACCTGCTTATGCCACCGGTTTTTAA 1047 0.426 MIMAGNPNWWSMHPPTLIPPQFVLGSSSIPMNFFTETQETPQSWSQMLFAGFPGEEDRMGSSNHFDESKKMENWEEQILDNNNNNNPSSRASSVPPSVVDVMKQEVSQSGNNLYGHGSDEFHHQASGSYNWLNNMMPPPVIPFTNISSPNNKSRTSNTNILDFTYNNKPDHNHSNQLQHNSSSSQSNNSSVSSGVCNKKARFQASSSQPPLKVRKEKLGDRITTLHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEALSSPYLSNAWKNIRNQQHPVHGERNSVFPEDPGQLLNDTGLKRKGAPNQEGEGKAKDLRSRGLCLVPVSCTQHVGNENGADYWAPAYATGF 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0884 348 MobiDBLite consensus disorder prediction 278 313 - -
Lele41g0884 348 CDD bHLH_AtbHLH_like 212 259 IPR045239 -
Lele41g0884 348 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 202 251 IPR011598 GO:0046983
Lele41g0884 348 MobiDBLite consensus disorder prediction 143 195 - -
Lele41g0884 348 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 77 330 - -
Lele41g0884 348 FunFam Transcription factor bHLH123 family 212 275 - -
Lele41g0884 348 Gene3D - 212 274 IPR036638 GO:0046983
Lele41g0884 348 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 212 266 IPR036638 GO:0046983
Lele41g0884 348 MobiDBLite consensus disorder prediction 145 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0884 Lele-ChrLele41 18420668 18424886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0884 54 292 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 43.284 1.32e-39 141