Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0879 ATGTGTCGCCAATCGCCAGTCGCGGGTCGCCGTCCCCAAACCCTAAATGAAAGACAAAGTGACAGTCAGACAATGTGCCTTCTTCCATGGCCATCTAATAACATGTCCAACGATCCTCATCACTACTTTCCCTCCCCTGCTCTCTCTCTCAGCCTCGCGGGAATCTTTCGCCATGATGATGAGGTGGCGCCGTCCAGCAACGCTGAGGTGGAACAGGCCGGCGGAGGAGGCGGGCGACGAGACAACACTACTGTTCAAGAGATTAGCAGTGAGAATTCTGGTGGGCTGATCGGGAGATCGTCGAGATCGGAGGATGGCTTCGAGGAAGAAGGCGACGAAGATGTTCAAGGTGACGGAGACAAGGTCAAGAACAAGAAAAAGAGGAAGAGATATCATAGGCACACTGCTGAGCAGATCAGAGTACTGGAAGCACTTTTCAGAGAGTCGCCACATCCTGATGAGAACCAAAGACAAGAACTTAGCCAGCAATTAGGCCTTGCTCCTAGGCAAGTCAAGTTTTGGTTCCAAAATCGTCGAACCCAAATCAAGGCTATACAAGAGCGCCATGAGAATTTATTGCTAAAGTCAGAAATGGATAAGCTTAGAGAGGAAAATGAAGGCTTGAGAGGGATCATAGACAAAGCTTGTTGCTCCAACTGTGGCGTCGCCACCATTTCCTCAGATTCTCCCATGCTTCCTGAACAACACCAACTACGTCTAGAAAATGCCAAACTCAAAGCTGAGATCGAGAAGCTTCGAACAGCAGTAGCGAAGGGCCAACCGGGGTCGACAACGCCACCTTCGAGCTGTATGGGGAATGAGCAAATGGAGAACGGAAGCTGTATGGAAATTTACAGTGGAATATTTGGGCTTGAGAAGGCAAGGATAATGGAGCTAGTTAAGGAAGCAATGGAAGAGCTCATAAAAATGGCAACTACGGAGGAACCACTATGGGTTCGTAGCGTAGAGACTGGTCGCCAAATACTTAATTATGATGAATATGTAAAACAGTTCAAAGTTGAACACTCGTCATCGTCGAAGAGATCATCGTACTCCATCGAAGCCTCGAGAGAAACTGGGGTTGTTCTTCTCGATCTCCCTCGTCTTCTTCAAATCTTCTTGGACGTGAATCAATGGAAGGAAATGTTTCCGAGCTTAATATCGAAGGCAGCTATTGTTGATGTTATTTCTAGTGGGGAAGGTGCTAACAGGGATGGTGCGGTGCAACTGATGTTCAGCGAGGTGCAAATGCTGACACCAATGGTGGGGAGTAGAGAAGTGTATTTTATGAGGTACTGTAAGCAATTGAATGAAGAAGAGTGGGCAATCGTGGACGTATCCACTGACCAAGCACAAGACACTAGTATTGAGGCTTCTCTCCTCAAATGCAGAAAACGCCCTTCCGGTTGCATCATTCAAGACACTTCCAATGGCCACTGCAAGGTAACATGGGTGGAGCACATAGAATGCGAGAAGACCAGAGTCGAGACAATGTACCGGAGCATCGTGAAGAGTGGGCTGGGCTTCGGGGCACGGCGGTGGCTGGCGACTTTACAGGTGCAATGCGAACGGGTCGTGTTCTTCATGGCGACGAATGTGCCGATGAAGGACTGCGTGGGTGTTGGGACGGTGGCCGGCCGGAAGAGCGTGATGAAGTTGGCCCAAAGAATGACAAGGAGTTTCTGCAACGCCGTTGGGGCTTCAAGCTTGAATACGTGGAGCAAGTTTAGTGGTGAGAATGGAGAAAACATAAGGGTTAGCTCGAGAAAGAACATGAATGAGCGTGGAGAGCCAGTTGGAGTGATATTATGTGCTGTTTCTTGCGCCTGGCTTCCAGTCTCACCTAATCTTCTCCTTCGGTTCTTGAGGGACCAAACTCCACTTACTCAGTGGCATGTGAGAACTGGCGGTGAGCACGTGCAGTCTATCGTAAACTTGGCCAAAGGAAAAGATCGAGGCAACGCTGTAACCATCCAGGCAGTTAAATCGGAAGACGACGGTAACAGTACGTGGATTCTGCAAGACAGCAGCACGAGTACGTACGAATCAACGGTGGTGTATGCTCCGGTGGACATCGCTCGCATGCAGTCGGTGATCACCGGCTGCGACTCCAGCGATGTCCCGATTCTGCCGTCAGGATTCTCCGTCGTCCCCGACGGAATGGAGGCCATAAGACCATTGATGATAGCTTCTTCATCAAAACAAGGAGGAGAAGAAGAAGAAAAGAGCACAGAAGAAGGGTCTCTGCTTACAATGGCGTTGCAGGTCCACGTCAGCACTTCTCCTTCTACTAAGCTAACACAGGACTCTGTTGAATCAGTCAATACTCTCGTGTCTTGTACTTTGAGAAATATCAGAACAAGTTTACAGTGTGAGGATGCTTAG 2385 0.4918 MCRQSPVAGRRPQTLNERQSDSQTMCLLPWPSNNMSNDPHHYFPSPALSLSLAGIFRHDDEVAPSSNAEVEQAGGGGGRRDNTTVQEISSENSGGLIGRSSRSEDGFEEEGDEDVQGDGDKVKNKKKRKRYHRHTAEQIRVLEALFRESPHPDENQRQELSQQLGLAPRQVKFWFQNRRTQIKAIQERHENLLLKSEMDKLREENEGLRGIIDKACCSNCGVATISSDSPMLPEQHQLRLENAKLKAEIEKLRTAVAKGQPGSTTPPSSCMGNEQMENGSCMEIYSGIFGLEKARIMELVKEAMEELIKMATTEEPLWVRSVETGRQILNYDEYVKQFKVEHSSSSKRSSYSIEASRETGVVLLDLPRLLQIFLDVNQWKEMFPSLISKAAIVDVISSGEGANRDGAVQLMFSEVQMLTPMVGSREVYFMRYCKQLNEEEWAIVDVSTDQAQDTSIEASLLKCRKRPSGCIIQDTSNGHCKVTWVEHIECEKTRVETMYRSIVKSGLGFGARRWLATLQVQCERVVFFMATNVPMKDCVGVGTVAGRKSVMKLAQRMTRSFCNAVGASSLNTWSKFSGENGENIRVSSRKNMNERGEPVGVILCAVSCAWLPVSPNLLLRFLRDQTPLTQWHVRTGGEHVQSIVNLAKGKDRGNAVTIQAVKSEDDGNSTWILQDSSTSTYESTVVYAPVDIARMQSVITGCDSSDVPILPSGFSVVPDGMEAIRPLMIASSSKQGGEEEEKSTEEGSLLTMALQVHVSTSPSTKLTQDSVESVNTLVSCTLRNIRTSLQCEDA 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0879 794 MobiDBLite consensus disorder prediction 62 131 - -
Lele41g0879 794 ProSitePatterns 'Homeobox' domain signature. 160 183 IPR017970 GO:0000981|GO:0006355
Lele41g0879 794 CDD START_ArGLABRA2_like 293 523 - -
Lele41g0879 794 Gene3D - 115 195 - -
Lele41g0879 794 CDD homeodomain 132 183 IPR001356 GO:0003677
Lele41g0879 794 Coils Coil 235 255 - -
Lele41g0879 794 ProSiteProfiles 'Homeobox' domain profile. 125 185 IPR001356 GO:0003677
Lele41g0879 794 MobiDBLite consensus disorder prediction 1 22 - -
Lele41g0879 794 MobiDBLite consensus disorder prediction 82 99 - -
Lele41g0879 794 Pfam Homeodomain 128 183 IPR001356 GO:0003677
Lele41g0879 794 SMART START_1 298 524 IPR002913 GO:0008289
Lele41g0879 794 Pfam START domain 300 524 IPR002913 GO:0008289
Lele41g0879 794 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 126 789 IPR042160 -
Lele41g0879 794 FunFam Homeobox-leucine zipper protein HDG1 113 201 - -
Lele41g0879 794 ProSiteProfiles START domain profile. 289 527 IPR002913 GO:0008289
Lele41g0879 794 SUPERFAMILY Homeodomain-like 119 186 IPR009057 -
Lele41g0879 794 SUPERFAMILY Bet v1-like 546 756 - -
Lele41g0879 794 Coils Coil 184 204 - -
Lele41g0879 794 SMART HOX_1 126 189 IPR001356 GO:0003677
Lele41g0879 794 FunFam Homeobox-leucine zipper protein GLABRA 2 298 523 - -
Lele41g0879 794 SUPERFAMILY Bet v1-like 291 524 - -
Lele41g0879 794 Gene3D - 297 518 IPR023393 -
Lele41g0879 794 PRINTS Lambda-repressor HTH signature 165 181 IPR000047 GO:0003677
Lele41g0879 794 PRINTS Lambda-repressor HTH signature 156 165 IPR000047 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0879 Lele-ChrLele41 18370959 18379187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0879 88 793 Homeobox Transcription Factor Family AT1G79840 56.643 0.0 790
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele41g0879 START 4.1e-55 CL0209