Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0846 ATGGGTCTCAATTCAAACCGGGTCGATCACTTCGATTCTCACCACTCAACTGTCGTCAAAATCCAAACCGATATTCCTTCCGTGGAAATCCATCCGGTTCGCCTCCCTCCTGAGCAAACCACTCTCCAGAAGCTCAAGCGCAGGCTCTCTGAGATCTTCTTCCCCGATGACCCTCTTCATGGCTTCAAGAACCAAACCCGGTTCACCAAACTCATCCTGACTCTTCAGTATCTCTTCCCCATTTTCCAGTGGGCCCCTCACTACTCCCTCAAACTCCTCCGTTCTGATATCATCTCTGGCCTCACCATTGCCAGCCTCGCCATTCCTCAGGGAATAAGCTATGCAAAGCTTGCAAATTTGCCACCGATAATCGGACTATATTCAAGTTTTGTGCCTCCATTGATATACTCTCTGCTTGGGAGTTCTAGGCATCTTGGGGTTGGTCCTGTGTCCATAGCCTCTCTGGTTATGGGGTCCATGTTAAGCGAATCAGTTTCTAACGTTTCAGATCCAATCCTCTACCTCAAACTCGCTTTCACTGCCACCTTCTTCGCTGGAGTATTCCAATCTTCTCTTGGCTTTCTCAGGTTAGGGTTTGTGATTGATTTTCTGTCAAAGGCAACGCTGGTGGGTTTCATGGCAGGGGCAGCCATTATAGTGTCTCTGCAACAGCTAAAAGGCTTACTGGGAATAACTCACTTCACTTCCAAGATGCAAATGATTCCTGTTATGTCCTCTGTTTTTAATCACAGAGATGAGTGGTCATGGCAAACAATTGTACTTGGATTAGCATTTTTGGCTTTCCTGCTTGCAACGAGGCACATTAGCATGAAGAAACCAAAACTATTCTGGGTGTCAGCAGCTGCTCCATTGACATCAGTTATTCTATCAACAATTTTAGTTTTTCTTCTCCGAAACAAGACTCATGGAATTGCAATTATTGGACACTTACCAAAAGGCCTTAATCCACCATCAACGAACATGTTGGTCTTCACTGGTCCTCACTTGGCACTTGCAATCAAAACTGGCATTATCACTGGGATTCTATCTCTTACTGAAGGAATTGCAGTAGGAAGAACATTTGGAGCACTTAAGAACTACCAAGTGGATGGAAACAAAGAAATGATGGCCATTGGTCTGATGAACATAGCTGGCTGTTGTTCTTCATGCTATGTCACCACAGGATCGTTTTCTCGATCAGCTGTCAACTACAACGCCGGAGCACAAACAGCCGTCTCAAACATAATAATGGCTGCAGCTGTTCTTGTGACCCTTCTGTTTCTCATGCCTCTGTTCTATTACACACCAAACTTCATCCTGGCAGCCATTATCATCACTGCTGTTATAGGACTGATAGATTATCAAGCTGCATATAAACTGTGGAAAGTCGACAAGCTTGATTTCTTGGCTTGTTTGTGCTCTTTCTTTGGTGTTCTGTTCATCTCAGTTCCCCTAGGCCTTGGTATTGCGGTTTCAATTTCAGTCTTCAAGATTCTGCTTCATGTGTCTCGGCCGAACACTCTAGTGTTGGGGAACATACCAGGAACACAAATATACCACAACCTAAATAGATACAGAGAAGCTTTGAGGGTTCCTTCATTTCTCATTTTGGCTGTTGAATCTCCCATCTACTTTGCTAATTCAACATACTTGCAAGAAAGGATACTGAGATGGGTCCGAGAAGAGGAAGAGCGCATAAAATCAAACAATGAAAGTACATTGAAGTGCATAATTCTAGATATGACAGCTGTGACAGCCATAGACACGAGTGGAATTGACACATTACGCGAACTTAGAAAGATTCTGGAAAAAAGATCATTTCAGTTTGTGTTGACAAATCCTGCAGGGACTGTGATGGAAAAGTTGCATCAATCAAATATCTTGGATTCCTTTGGGCAGAAAGGACTCTATCTCACGGTGGGAGAAGCTGTGGCTGACATTTCTTTGTCCTGGAAAGCTGAGCCTTGA 1968 0.4405 MGLNSNRVDHFDSHHSTVVKIQTDIPSVEIHPVRLPPEQTTLQKLKRRLSEIFFPDDPLHGFKNQTRFTKLILTLQYLFPIFQWAPHYSLKLLRSDIISGLTIASLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSLLGSSRHLGVGPVSIASLVMGSMLSESVSNVSDPILYLKLAFTATFFAGVFQSSLGFLRLGFVIDFLSKATLVGFMAGAAIIVSLQQLKGLLGITHFTSKMQMIPVMSSVFNHRDEWSWQTIVLGLAFLAFLLATRHISMKKPKLFWVSAAAPLTSVILSTILVFLLRNKTHGIAIIGHLPKGLNPPSTNMLVFTGPHLALAIKTGIITGILSLTEGIAVGRTFGALKNYQVDGNKEMMAIGLMNIAGCCSSCYVTTGSFSRSAVNYNAGAQTAVSNIIMAAAVLVTLLFLMPLFYYTPNFILAAIIITAVIGLIDYQAAYKLWKVDKLDFLACLCSFFGVLFISVPLGLGIAVSISVFKILLHVSRPNTLVLGNIPGTQIYHNLNRYREALRVPSFLILAVESPIYFANSTYLQERILRWVREEEERIKSNNESTLKCIILDMTAVTAIDTSGIDTLRELRKILEKRSFQFVLTNPAGTVMEKLHQSNILDSFGQKGLYLTVGEAVADISLSWKAEP 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0846 655 SUPERFAMILY SpoIIaa-like 529 645 IPR036513 -
Lele41g0846 655 Gene3D STAS domain 504 648 IPR036513 -
Lele41g0846 655 PANTHER SULFATE TRANSPORTER 43 646 IPR001902 GO:0016020|GO:0055085
Lele41g0846 655 CDD STAS_SulP_like_sulfate_transporter 525 640 - -
Lele41g0846 655 Pfam Sulfate permease family 93 472 IPR011547 GO:0016020
Lele41g0846 655 ProSiteProfiles STAS domain profile. 524 647 IPR002645 -
Lele41g0846 655 TIGRFAM sulP: sulfate permease 80 643 IPR001902 GO:0016020|GO:0055085
Lele41g0846 655 Pfam STAS domain 525 643 IPR002645 -
Lele41g0846 655 FunFam Sulfate transporter 31 504 650 - -
Lele41g0846 655 ProSitePatterns SLC26A transporters signature. 122 143 IPR018045 GO:0008271|GO:0008272
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0846 Lele-ChrLele41 18175023 18179842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0846 1 654 Inorganic Solute Cotransporters AT3G15990 76.606 0.0 1040
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0846 41 18175023 18179842 Lele37g0442 37 3617104 3618189 CCT
Lele41g0846 41 18175023 18179842 Lele38g0409 38 3279995 3281077 CCT
Lele41g0846 41 18175023 18179842 Lele39g0986 39 18689473 18690558 CCT
Lele41g0846 41 18175023 18179842 Lele40g0387 40 3123743 3124501 CCT
Lele41g0846 41 18175023 18179842 Lele43g0546 43 4919949 4924796 hybridization
Lele41g0846 41 18175023 18179842 Lele44g0510 44 3905950 3910360 hybridization