Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0841 ATGGAGGAAAGCAACGATCGAAATTCTCCTTCAGTGAGGACAGGTGGCAGTTTTAAATCCACTTTGTCCGGAAGATCAACTCCACGATCCTCTCCGTCATTTCGGCGACTAAATTCTGGCAGAACACCAAGAAGAGAAGGCAGAAGTAGTTTTGCTGGTTCCCAGAGGTTTCGTGGCAATCGAGTACTGTTATGGTTGCTTCTCATTACCCTCTGGGCTTATCTTGGATTTCTTGTTCAGTCCAGGTGGGCACATAGTTATAAGAAGGATGAATTTTCGGGCTTTGGAATTGGAGGCAGGTTAAGTGACACAAACTCAGATGTTGAACAGAGTAGGCGTCATGATTTGGTTGCTGGTGATAATTCCTTATTCCTTAATAATTACACAGTTAAACATGAGATGCAGGTTGGGAAAAAAATGACCGTGGCTTTGGCCCAGAAAGAAGATAGTGTTCCATCTCCTCGCAAAACAAGCTCCAAGAAGAAGAGTAGACGATCACGATCTAGAGGTAGAGCACGTCGCAAGCTGAAACCAACAGTGGAAGTTGAGAACAGAGACATAGAGGAGCAAGACTCGGAAATTCCTAAAAAGAATACTACCTATGGATTGCTTGTTGGTCCATTTGGCTTGACAGAGGATAAAATTCTGGAATGGAGTCCTGAGAGGCGTTCTGGAACCTGTAACAGGAAGGGGGACTTCGCACGTCTTGTTTGGTCCAGGAGATTTATCTTAATATTCCACGAGCTTTCTATGACTGGAGCTCCACTTTCTATGATGGAGTTGGCGACAGAGCTTTTGAGCTGTGGGGCTAGTGTCTCTGCTGTTGTGCTTAGCAGGAAGGGTGGCTTGTTGCCAGAGCTAACTAGGAGACGAATCAAGGTGCTTGAGGATAGAGCAGATAACAGCTTCAAAACTGCAATGAAGTATGATCTAGTCATTGCTGGATCAGCTGTTTGTGCTTCATGGATCGAACAATATATTGAACGTTTTCCTGCTGGTGCAAGTCAAGTTGCTTGGTGGATTATGGAAAACCGACGAGAGTACTTCGATCGTTCAAAGGCTGTCCTGCACAGAGTAAAACTGCTGGTATTCCTTTCCGAGTTGCAATCTAAGCAATGGAAAAGGTGGTGTGAGGAAGAAAACATAAAACTGAGGTATCAGCCTGCACTGGTTCCATTGTCCGTGAATGATGAATTGGCTTTTGTAGCTGGCATTCCTTCTACACTTAATACTCCATCCTTTAGTGCTGAGAAAATGTTAGAGAAAAGACAATTGTTAAGAGATGCGGTCCGAAAGGAAATGGGCTTGACTGATAATGATATGCTTGTGATGACTTTGAGTAGCATAAACCCAAGTAAGGGTCAGCTATTGCTTCTTGAATCAGCAAGCACGATAGTAGAACATGGACAGTTGCGAGATAGTAAGACCACAAAAAAATCATCAGATGTGGGAGAAGGCCTATCTACCCTGGCTAGAAGACATCATATTAGAAGTTTGATGCAATTGTTGAATGCTGACGATAGAGCTTTGCATGATATCTCAAGCATACCTTTGAACAGAAGGAAGGTGTTGTCAAACAATGAAACACTGTTGGATCAATCTCTCAGAATTCTTATTGGTTCTGTTGGAAGTAAAAGTAACAAAGTGGATTATGTTAAAGGTCTTCTGACTTTCTTATCTCAGCATTCAAACTTGTCAAAGTCAGTTTTGTGGACTCCATCAACAACACGTGTTGCCTCACTTTATTCTGCTGCGGATGTTTATGTCATAAATTCTCAGGGACTAGGAGAAACATTTGGGAGGGTGACTATTGAAGCAATGGCATTTGGGCTTCCGGTGCTTGGAACAGATTCTGGAGGAACACTAGAAATTGTTGAGCACAACGTTACAGGTCTTCTTCATCCTACTGGACGTCCAGGGATTCCTGTCCTCACGCAAAATCTACGGTTTTTACTTGAAAACCGGTCGGCCAGGGAACGAATGGGATTGGAGGGAAGAAAGAAGGTGCAAAGGATGTACTTGAAGAAGCATATGTACAAGAGTTTCGTAGAGGTTATCGTTAGGTGCATGAGAAGCAAATAA 2082 0.4323 MEESNDRNSPSVRTGGSFKSTLSGRSTPRSSPSFRRLNSGRTPRREGRSSFAGSQRFRGNRVLLWLLLITLWAYLGFLVQSRWAHSYKKDEFSGFGIGGRLSDTNSDVEQSRRHDLVAGDNSLFLNNYTVKHEMQVGKKMTVALAQKEDSVPSPRKTSSKKKSRRSRSRGRARRKLKPTVEVENRDIEEQDSEIPKKNTTYGLLVGPFGLTEDKILEWSPERRSGTCNRKGDFARLVWSRRFILIFHELSMTGAPLSMMELATELLSCGASVSAVVLSRKGGLLPELTRRRIKVLEDRADNSFKTAMKYDLVIAGSAVCASWIEQYIERFPAGASQVAWWIMENRREYFDRSKAVLHRVKLLVFLSELQSKQWKRWCEEENIKLRYQPALVPLSVNDELAFVAGIPSTLNTPSFSAEKMLEKRQLLRDAVRKEMGLTDNDMLVMTLSSINPSKGQLLLLESASTIVEHGQLRDSKTTKKSSDVGEGLSTLARRHHIRSLMQLLNADDRALHDISSIPLNRRKVLSNNETLLDQSLRILIGSVGSKSNKVDYVKGLLTFLSQHSNLSKSVLWTPSTTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGLPVLGTDSGGTLEIVEHNVTGLLHPTGRPGIPVLTQNLRFLLENRSARERMGLEGRKKVQRMYLKKHMYKSFVEVIVRCMRSK 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0841 693 Pfam Glycosyl transferases group 1 558 667 IPR001296 GO:0016757
Lele41g0841 693 Gene3D Glycogen Phosphorylase B; 415 673 - -
Lele41g0841 693 MobiDBLite consensus disorder prediction 143 179 - -
Lele41g0841 693 PANTHER BNAA05G14870D PROTEIN 8 693 - -
Lele41g0841 693 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 246 685 - -
Lele41g0841 693 MobiDBLite consensus disorder prediction 8 52 - -
Lele41g0841 693 MobiDBLite consensus disorder prediction 157 174 - -
Lele41g0841 693 Pfam Glycosyl-transferase family 4 238 407 IPR041693 -
Lele41g0841 693 MobiDBLite consensus disorder prediction 1 52 - -
Lele41g0841 693 CDD GT4_PimA-like 243 686 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0841 Lele-ChrLele41 18120074 18124021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0841 16 691 Glycosyltransferase AT3G15940 61.281 0.0 806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0388 38 3143368 3148918 Lele41g0841 41 18120074 18124021 CCT
Lele39g1015 39 18860814 18864776 Lele41g0841 41 18120074 18124021 CCT
Lele40g0367 40 3001708 3003100 Lele41g0841 41 18120074 18124021 CCT
Lele41g0841 41 18120074 18124021 Lele43g0552 43 4977148 4981068 hybridization
Lele41g0841 41 18120074 18124021 Lele44g0515 44 3961532 3964636 hybridization