Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0832 ATGGTGGGGTGGCCGCCGGTGAGGGCGAGCAGAAAGAGCGTTATAAAGAAATGCAAGTACGTGAAGGTGGCCGTCGACGGAGCTCCGTATCTCAGAAAAGTGGATCTTGAAATGCATCAGAGTTATGAGGAACTTCTAAGTTCCTTAGAAACCATGTTCAGCTGCTTAACCATCCGTACGTATCATATATATATAAATCTTCTTGGATCCATCTCTGAGAAATTCTTAAATTCTGTCGATGTACAAGGAAGGAGGGGTGATTTAGTCTTTTTATGTGGATTATTTACAGGCAATGATTTGAATCAGAATGATGAGAGTGGTGGAAAGAAGAATAATAATGGAGGCGAATACGTACCAACCTATGAGGACAAAGATGGAGACTGGATGATGATCGGAGATGTCCCCTGGAAGATGTTTGTGGAATGCTGCAAAAGAATGAGGTTGATGATGAGCTCAGAGGCCACTGGGTTAGGTCCGAGAAGAGGTTCATCTAAGTGA 498 0.4337 MVGWPPVRASRKSVIKKCKYVKVAVDGAPYLRKVDLEMHQSYEELLSSLETMFSCLTIRTYHIYINLLGSISEKFLNSVDVQGRRGDLVFLCGLFTGNDLNQNDESGGKKNNNGGEYVPTYEDKDGDWMMIGDVPWKMFVECCKRMRLMMSSEATGLGPRRGSSK 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0832 165 ProSiteProfiles PB1 domain profile. 18 151 IPR000270 GO:0005515
Lele41g0832 165 SUPERFAMILY CAD & PB1 domains 11 149 - -
Lele41g0832 165 Gene3D - 13 163 - -
Lele41g0832 165 Pfam AUX/IAA family 16 160 IPR033389 -
Lele41g0832 165 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 1 155 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0832 Lele-ChrLele41 18034973 18035780 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele41g0832 AUX_IAA 9.1e-43 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0832 41 18034973 18035780 Lele44g0523 44 4065108 4065976 hybridization