Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0818 ATGTGTACTCTAGCTATTAGTTTCCTCACACATTTGAATCCTATATATATAATGACCTATTACATGAAGCTTTCAAGTCTCGACTTCTTCTATTGCTCTACTTGGATCACTTTTCATTTCCATCATCAGTTCCTAGTAACTCTTTTGCAATCACATGCAATAAAGTTTGAATCTTTTAGAGCCATTCTTTCTGTAGTTCCCTTAGAAATGGACAGCTTCAAGGCACCTTTCAAGGGCGTAGTTAATGATGTTCGAGGGAGAGCAAAATGTTACAAACAAGACTGGATTTCTGGTCTCTGTTCAGGAATTGGGATATTGGCTCCAACTACCTATATTTTCTTCGCTTCTGCTCTTCCTGTTATAGCCTTCGGAGAACAGCTCGATATAGACACAGATGGAAGCTTGAGCCCAGTAGAGACACTGGCGTCAACTGCGATATGTGGAATGATACACTCAGTTATTGGAGGCCAACCCTTAATAATATTAGGAGTTGCAGAGCCAACTATCGTCATGTACATTTACATGTACACTTTTGCTAAAGATAGAGATGGTTTAGGACGACAACTTTTCTTAGCTTGGGCTGCATGGACTTGCGTTTGGACGGCTCTGATGTTGTTTCTTATTGCAATATTCAATGTTGCTGCCTGGGTACATAGATTCACCAGGATTGCCAGCGAGCTTTTTAGCATGTTGATCACCGTCTTGTTCCTTAAAGAGGCTATAAAGGGAATGGTTAGTGAGTTTAAGGTACCTAAACATGGGATCGAAGACCCAGCCTTAGAGAAAAACAAATTTCATTGGCTTTATGTAAATGGACTATTGGGAATTACATTCTCCTTTGGCCTTCTCTTTTCTTCTCTTACGATCAGGAAAGCTAGATCATGGCTATACGGCACAGGAAAGTTGAGAAGTTTCTTTGCAGACTACGGGGTTCCTTTGATGGTAGTACTGTGGACAGCTTTGTCTTTCACAGTACCAATTAGTAAACTTCCCTCTGAAGTCCCTAGAAGGCTCATTGCTCCTCTTGCTTGGGAATCTACTTCTTTACACCATTGGAAAGTCGTCCAAGATATGGTGAAGGTGCCACCTGCATATATTTTTGGTGCTATTATTCCTGCATTCATGATTGCGGGTCTTTACTTCTTCGATCATAGTGTTGCTTCTCAGTTAGCAGAACAGAAGGAATTCAATCTGAAGAAACCTTCTGCTCATCACTATGACATGTTGTTGCTAGGATTTCTGACTTTGCTTTGTGGGTTGATTGGTTTGCCACCTTCTAGTGCACTTCTTCCTCAGTCCCCCATGCACACTAAAAGCCTTGCTGTTCTCAAGAACCAGTTGATTCGGAGGAAGATGGTGGAAAGTGCCAAAGAAAGCATAAGGGGCAAAGCAAGCAACTCAGAGATCTATGGAAAAATGCAAGCAGTATTCATAGAAATTGACAAAAGCCCAATTACTTCGGTGGTTAAAGAACTAGAGGACCTAAAAGAAGCAATCCTAAAAGGGCAAGAAAAATTGGACAGTACATTATTTAACCCTGAGACACATATTAATGAACATCTGCCCATAAGAGTGAAAGAGCAAAGAGTGAGTAATCTGTTACAGTCAATACTTGTAGGAGCATCAGTGTTTGCTTTACCTCTCTTAAAGAAGATACCCACTTCAGTTCTGTGGGGTTACTTCGCTTACATGGCCATTGATAGTCTTCAAGGAAACCAATTCTGGGAAAGAATACTATATATCCTCATATCCCAAAACAGACGATACAAGGTGTTGGAGGGGGACCATGCTTCATTTGTGGAGACAGTACCATTCAGAGCCATACTAATGTTCACAGTGTTGCAATGTGTGTATTTGTTGGTTTGTTTCGGAGTGACTTGGATTCCCATGGCAGGAATGTTGTTTCCTTTGCCATTGTTCTTGCTCATCATAATAAGACAATATTTGTTACCAAAGCTCTTCAATCCTCACTATTTAAAGGAACTTGATGCTGCTGAATATGAAGAAATTGTGGGCACTTCAAGGCTTTCCTTCCGTCACTCTTCTCGCCTCAATCTCCACCAGGATATGAAATCACCAAGCATGCAATCAAGGGAAATGGATGACGACGACGACGACGAGATATTAAACGAGGCTCTAACAGGTAGAGGAGAGTTAAAAGTTAAAGCTATTAGCTTCAGAGAGGAAAGACATGCACATGCACACGTTTTACACAGAGACTTAAAGGTCAAAGCTGTTAGCTTCAGAGATGAAAGACATGCCCGTGCACATCAGAAGATGATGAATGCATCATGA 2295 0.4109 MCTLAISFLTHLNPIYIMTYYMKLSSLDFFYCSTWITFHFHHQFLVTLLQSHAIKFESFRAILSVVPLEMDSFKAPFKGVVNDVRGRAKCYKQDWISGLCSGIGILAPTTYIFFASALPVIAFGEQLDIDTDGSLSPVETLASTAICGMIHSVIGGQPLIILGVAEPTIVMYIYMYTFAKDRDGLGRQLFLAWAAWTCVWTALMLFLIAIFNVAAWVHRFTRIASELFSMLITVLFLKEAIKGMVSEFKVPKHGIEDPALEKNKFHWLYVNGLLGITFSFGLLFSSLTIRKARSWLYGTGKLRSFFADYGVPLMVVLWTALSFTVPISKLPSEVPRRLIAPLAWESTSLHHWKVVQDMVKVPPAYIFGAIIPAFMIAGLYFFDHSVASQLAEQKEFNLKKPSAHHYDMLLLGFLTLLCGLIGLPPSSALLPQSPMHTKSLAVLKNQLIRRKMVESAKESIRGKASNSEIYGKMQAVFIEIDKSPITSVVKELEDLKEAILKGQEKLDSTLFNPETHINEHLPIRVKEQRVSNLLQSILVGASVFALPLLKKIPTSVLWGYFAYMAIDSLQGNQFWERILYILISQNRRYKVLEGDHASFVETVPFRAILMFTVLQCVYLLVCFGVTWIPMAGMLFPLPLFLLIIIRQYLLPKLFNPHYLKELDAAEYEEIVGTSRLSFRHSSRLNLHQDMKSPSMQSREMDDDDDDEILNEALTGRGELKVKAISFREERHAHAHVLHRDLKVKAVSFRDERHARAHQKMMNAS 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0818 764 Gene3D Helical hairpin bin 87 128 - -
Lele41g0818 764 FunFam probable boron transporter 2 87 129 - -
Lele41g0818 764 PANTHER ANION EXCHANGE PROTEIN 70 671 IPR003020 GO:0005452|GO:0006820|GO:0016020
Lele41g0818 764 Pfam HCO3- transporter family 273 445 IPR011531 GO:0006820|GO:0016020
Lele41g0818 764 Pfam HCO3- transporter family 76 249 IPR011531 GO:0006820|GO:0016020
Lele41g0818 764 Pfam HCO3- transporter family 523 614 IPR011531 GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0818 Lele-ChrLele41 17887775 17892799 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0818 70 730 Antiporters AT1G74810 63.827 0.0 878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0818 41 17887775 17892799 Lele37g0477 37 3938964 3940785 CCT
Lele41g0818 41 17887775 17892799 Lele38g0445 38 3622091 3622713 CCT
Lele41g0818 41 17887775 17892799 Lele39g0948 39 18351199 18352992 CCT
Lele41g0818 41 17887775 17892799 Lele43g0579 43 5209700 5218998 hybridization
Lele41g0818 41 17887775 17892799 Lele44g0539 44 4209162 4213764 hybridization