Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0778 ATGTTCTCGGCTTCTCTCAAAGTGTTACGGTTCGGAGAAGTTTTCTACAGAGAAATACGAGGAGGTGGAATTGATTGGTCAGAAGGGTATATGGCTTTTTGTCCAATCTTTTGTTTTGGAAAGGGTTCGGATCGCAAATTACGAGGGCAGGCACAACCAACATGGCGAGTCTTTTCCTTAAAGGAGCTACACTCAGCTACAAATAATTTCAATTATGATAATAAACTTGGAGAAGGGGGATTTGGCAGTGTTTACTGGGGCCAGCTTTGGGATGGATCACAAATTGCTGTGAAAAGATTGAAAGCTTGGAGCAACAAAGCAGATATGGAATTTGCTGTTGAAGTCGAGATATTGGCAAGAGTTCGGCACAAGAATCTTCTTAGCCTGCGGGGCTATTGTGCTGAAGGACAGGAACGGTTAATTGTATATGGCTATATGCCGAATTTGAGCTTACTCTCTCATCTTCATGGACAGCACTCGGCAGAATGCCTTCTGAATTGGAGCAGACGGATGAGTATTGCAATTGGATCAGCAGAGGGAATCGCATATCTCCACCACCAAGCAACTCCACACATCATCCACAGAGATATTAAAGCAAGCAACGTGCTCTTAGATGTGGATTTCGGGGCTCAGGTTGCAGATTTTGGTTTCGCTAAGTTGATCCCTGATGGGGCGACACATGTGACTACAAGAGTTAAGGGTACCCTTGGCTATCTTGCACCTGAGTATGCTATGTTAGGGAAAGCATCCGAGAGTTGCGATGTCTACAGTTTTGGAATTCTCTTGCTGGAACTCGCGACTGGCAGGAAACCGATTGAAAAACTGAGTGCAACAGTGAAGCGGTCGATAACCGATTGGGCACTACCATTGGTTTTAGAGAAGAAATTTAATGAAATTGCAGATGCAAGACTAAATGGTGACTATGTGGAGGAAGAGCTTAAAGGGGTTGTTTATGTTGCACTCGTTTGTGCTCAGAATCAACCTGAGAAGAGACCCAACATGCTGGAGGTGGTAGAGCTATTGAAGGGAGAATCTAAGGTTAAGTGTTCTCAGCTAGAGAATCATGAACTTTTCAGAAGCCCTCAACCCGCCGATTCCAATGATGACGACAGGATACAACCTGCTGAAGATAGTTGTGACTTTATATCAGCAGAAAATGAATCAAAACCTGAGTTGAAGGAGAACCCTGAGCCATAA 1197 0.4419 MFSASLKVLRFGEVFYREIRGGGIDWSEGYMAFCPIFCFGKGSDRKLRGQAQPTWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKAWSNKADMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYGYMPNLSLLSHLHGQHSAECLLNWSRRMSIAIGSAEGIAYLHHQATPHIIHRDIKASNVLLDVDFGAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELATGRKPIEKLSATVKRSITDWALPLVLEKKFNEIADARLNGDYVEEELKGVVYVALVCAQNQPEKRPNMLEVVELLKGESKVKCSQLENHELFRSPQPADSNDDDRIQPAEDSCDFISAENESKPELKENPEP 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0778 398 MobiDBLite consensus disorder prediction 356 398 - -
Lele41g0778 398 FunFam PTI1-like tyrosine-protein kinase At3g15890 146 357 - -
Lele41g0778 398 Gene3D Phosphorylase Kinase; domain 1 42 145 - -
Lele41g0778 398 Pfam Protein tyrosine and serine/threonine kinase 72 341 IPR001245 GO:0004672|GO:0006468
Lele41g0778 398 ProSitePatterns Protein kinases ATP-binding region signature. 76 98 IPR017441 GO:0005524
Lele41g0778 398 CDD STKc_IRAK 76 343 - -
Lele41g0778 398 Gene3D Transferase(Phosphotransferase) domain 1 146 358 - -
Lele41g0778 398 ProSiteProfiles Protein kinase domain profile. 70 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0778 398 FunFam PTI1-like tyrosine-protein kinase At3g15890 42 145 - -
Lele41g0778 398 PANTHER OS01G0253100 PROTEIN 51 346 IPR045271 -
Lele41g0778 398 MobiDBLite consensus disorder prediction 362 398 - -
Lele41g0778 398 SMART serkin_6 70 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0778 398 SUPERFAMILY Protein kinase-like (PK-like) 51 341 IPR011009 -
Lele41g0778 398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0778 Lele-ChrLele41 17638095 17640990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0778 40 344 Trihelix Transcription Factor Family AT1G70460 48.867 2.76e-93 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Lele41g0778 PK_Tyr_Ser-Thr 4.5e-42 CL0016