Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0748 ATGGAGGGATCTGGAGATAACTGGCCCTATTATCAGGTAATGGACATGAACACGAATCTGGAGAAAGCGATTAACTATGTGAGCTATCTGGAGGGGAGAGTGAGAGAGCTTGAGAACCAGAACAAGACGAGCGCGGAGGCGTGCCCAGCTTATAATAATAGCAACTACTACGACGGCGCGTCGTCGTCGTGCTGTGAGAGGAGCGTGGACGATGAGTGGTACGAGGCGGCGCTGCCGGAGGTGAAAGCGAGGGTTTCGGAGAACGAAGTGCTGATAATAATTCACTGTGAGAAACAAAAGGGAATTATGCATAAAATATTGTCTCAGCTTGAAACTCTTCATCTCTCTGTTATCAGTAGCAGCGTCTTGCCCTTTGGGACATTCACTCTTGACATCACCATCGTTGCTCAGATGGGGGAAGGATTCAACTCAACGGTGAGTGGCATAGTGAAAAGCCTGAGACGAGCCATCTCCAAGTAA 480 0.4896 MEGSGDNWPYYQVMDMNTNLEKAINYVSYLEGRVRELENQNKTSAEACPAYNNSNYYDGASSSCCERSVDDEWYEAALPEVKARVSENEVLIIIHCEKQKGIMHKILSQLETLHLSVISSSVLPFGTFTLDITIVAQMGEGFNSTVSGIVKSLRRAISK 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0748 159 PANTHER BHLH TRANSCRIPTION FACTOR 14 157 - -
Lele41g0748 159 Coils Coil 20 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0748 Lele-ChrLele41 17397299 17398508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0748 9 158 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 39.735 1.29e-26 100
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0479 38 3857618 3859711 Lele41g0748 41 17397299 17398508 CCT
Lele39g0917 39 18124479 18128989 Lele41g0748 41 17397299 17398508 CCT
Lele40g0452 40 3723035 3725128 Lele41g0748 41 17397299 17398508 CCT
Lele41g0748 41 17397299 17398508 Lele43g0646 43 5741429 5742516 hybridization
Lele41g0748 41 17397299 17398508 Lele44g0599 44 4652592 4654360 hybridization