Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0745 ATGAACGAAAATTTCTTCTTCCTTCCAGCTCATCCAACAAAACCATGCAGCTGCGTTACCGCCACAAACGTGACACCTTTTCCACCACCACCTCTGGAGGGAATCGCCGCCGTGGTGGGTCAGCACGTGCTCTTCGGACACAACCACTCAACCACCTCCGCCACTGCCAGCATTAACAGCAAAAACCACGACCTCAACGGCTCAAAAGTTTTCATGTCGGTGCAGAAACGAGAAAACAAGAGCGCAACGACGGGTGGGAGTAGTCTGTCGGTGAACAAGAGCTACAGGGGAGTGAGGAAGAGGCCGTGGGGGAGGTGGTCGGCTGAGATACGCGACAGAATCGGGAGGTGCCGGCACTGGCTGGGTACGTTCGACACGGCGGAAGAAGCAGCCCGTGCGTACGACGCTGCAGCAAGGCGACTGAGAGGCGCTAAAGCGAGAACTAACTTCGAGATAACTTCAGTGCTGCCATTATCGTCACCTTCTTCTTCATCTTCAAATTCAAGCTCAGAAGTGAAAAGCAAGGGCAAGGCTATGGGGAATAACACTAAAAAATGCTGTGTGGTTACCTCTGTAGCTCAATTGTTCAGTGTGGTGCCTGAAACTGTGAGAGAAAATAATAATGATGGTAGTGAGAAGAAGACAAGTTCATCAGGTTTTGGTAACAATGTAGAACTAGACTTGAAGCTAGGTAGATCCACGAGAATGGTCGTGTAG 717 0.5063 MNENFFFLPAHPTKPCSCVTATNVTPFPPPPLEGIAAVVGQHVLFGHNHSTTSATASINSKNHDLNGSKVFMSVQKRENKSATTGGSSLSVNKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGAKARTNFEITSVLPLSSPSSSSSNSSSEVKSKGKAMGNNTKKCCVVTSVAQLFSVVPETVRENNNDGSEKKTSSSGFGNNVELDLKLGRSTRMVV 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0745 238 FunFam Ethylene-responsive transcription factor 2 93 152 - -
Lele41g0745 238 ProSiteProfiles AP2/ERF domain profile. 94 151 IPR001471 GO:0003700|GO:0006355
Lele41g0745 238 Coils Coil 127 147 - -
Lele41g0745 238 CDD AP2 93 153 IPR001471 GO:0003700|GO:0006355
Lele41g0745 238 MobiDBLite consensus disorder prediction 156 180 - -
Lele41g0745 238 MobiDBLite consensus disorder prediction 156 177 - -
Lele41g0745 238 MobiDBLite consensus disorder prediction 203 224 - -
Lele41g0745 238 SMART rav1_2 94 157 IPR001471 GO:0003700|GO:0006355
Lele41g0745 238 SUPERFAMILY DNA-binding domain 94 152 IPR016177 GO:0003677
Lele41g0745 238 Pfam AP2 domain 94 143 IPR001471 GO:0003700|GO:0006355
Lele41g0745 238 PRINTS Ethylene responsive element binding protein signature 95 106 IPR001471 GO:0003700|GO:0006355
Lele41g0745 238 PRINTS Ethylene responsive element binding protein signature 117 133 IPR001471 GO:0003700|GO:0006355
Lele41g0745 238 Gene3D AP2/ERF domain 93 153 IPR036955 GO:0003700|GO:0006355
Lele41g0745 238 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 75 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0745 Lele-ChrLele41 17379246 17379962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0745 33 197 AP2-EREBP Transcription Factor Family AT1G80580 49.091 6.05e-27 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele41g0745 AP2 2.9e-15 CL0081