Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0741 ATGGCGGACCTTGAAGAAATCAAGAAAGAGAATGTTGATCTTGAAAGCAAGTTCCTGAAATTCTTGGGGTTTATGTGGAACCCTCTATCATGGGTGATGGAAGCTGCCGCCCTCATGGCCATTGCGTTGGCTAATGGCGGGGGCCAACCACCGGATTGGCAAGATTTTGTTGGAATAGTGGTGTTGCTGTTTATCAACTCCACAATCAGCTTTATAGAAGAGAACAATGCAGGGAATGCAGCTGCAGCACTAATGGCAAATCTCGCTCCAAAAACCAAGGTCCGCCGGGATGGAGCGTGGGTCGAGCAGGACGCTGCTATATTAGTACCTGGAGACATTATCAGCGTCAAGCTTGGAGATATCATCCCTGCAGATGCTCGTCTCTTGGAAGGTGATCCTCTCAAGATTGATCAATCTGCACTTACTGGTGAATCCTTGCCCGTCACAAAGAATCCAGGTGATGAAGTCTTCTCTGGTTCCACTGTTAAGCAAGGTGAGATTGAAGCCATTGTCATTGCCACTGGTGTACACACCTTCTTTGGTAAGGCTGCTCACTTAGTGGACAGTACCAACCAAGTTGGACACTTCCAAAAAGTTTTGACAGCAATTGGGAACTTCTGTATTTGCTCCATTGCTGTGGGGATAGTTATAGAGATTGTGGTCATGTACCCAATTCAGCACCGCAGGTATAGGGATGGAATTGACAATCTCTTGGTGCTTCTCATTGGAGGGATTCCCATTGCCATGCCGACAGTCTTGTCTGTAACAATGGCTATCGGTTCGCATCGACTTTCTCAGCAAGGAGCCATCACCAAGAGGATGACTGCCATTGAGGAAATGGCAGGCATGGATGTCTTGTGTAGTGACAAGACTGGTACTCTAACATTGAACAAGCTCACAGTGGACAAGGCTCTAGTGGAGGTTTTTGAGAAAGACATAGACAAGGACATGTTGATTTTGCTTGGAGCTAGGGCCTCTAGGGTGGAAAACCAGGATGCTATTGATGCTTGCATTGTTGGAATGTTGGGTGACCCAAAGGAGGCTAGAGATGGCATCCAAGAAGTGCATTTCCTTCCCTTTAATCCAGTGGACAAGCGTACAGCCATTACATACATTGACTCTGCAGGCAATTGGCATAGAGTTAGCAAAGGTGCTCCAGAGCAGATTATCTCTCTCTGCAATCTCCGGGGTGATGTGCTGAAAAGATCACATGCCATTATTGACAAGTTCGCTGACCGTGGTCTTCGGTCTCTTGCTGTTTGTAGACAAGAAGTCCCAGAGAAGACAAAGGAAAGTGCAGGAGGACCATGGCATTTTGTTGGTCTCTTACCTCTCTTTGATCCACCAAGACATGACAGTGCAGAGACCATCAGAAAAGCTCTTGGACTCGGAGTCAATGTGAAGATGATCACCGGTGACCAACTCGCCATCGGTAAAGAAACCGGTCGCAGGCTTGGAATGGGAAGCAACATGTACCCTTCTTCCTCTCTCCTTGGTGAACACAAGGATGAGTCTGTTGCTGCTCTTCCCATTGATGAGCTTATTGAAAAGGCTGATGGCTTTGCTGGAGTCTTTCCTGAGCACAAGTATGAGATTGTGAAGAGGCTGCAAGATAGGAAGCACATCTGTGGGATGACTGGAGATGGGGTGAATGATGCACCAGCCTTGAAGAGAGCAGATATCGGAATTGCAGTTGCTGATGCAACCGATGCAGCTCGAAGCGCGTCTGACATAGTCCTAACTGAACCGGGTTTGAGTGTGATTATCAGTGCAGTTTTAACAAGCAGGGCTATTTTCCAGAGGATGAAGAACTACACCATTTATGCAGTCTCCATTACAATCCGTATTGTTCTGGGATTTATGCTTCTTGCTCTTATCTGGAAATACGATTTCTCACCTTTCATGGTTCTGATCATCGCTATACTCAATGATGGCACCATCATGACCATTTCCAAGGACAGAGTGAAGCCATCTCCAATTCCTGATTCATGGAAACTCAATGAGATTTTCGCTACTGGCGTCGTTCTTGGTGCCTACCTTGCTGTCATGACTGTTGTCTTCTTCTGGGCTGCTCATGCATCTGATTTCTTCACGGAACGTTTTGGAGTTAGATCTATCAGGCACAGCCCAGAAGAGCTAACAGCAGCTGTTTACCTTCAAGTGAGTATAGTGAGTCAAGCTCTCATCTTTGTCACTCGTTCAAGGAGCTGGTCTTATGTTGAACGCCCCGGTCTCTTGCTTCTCGGCGCCTTTCTCATTGCTCAATTGATCGCGACCTTATTAGCCGTGTATGCAAACTGGGAATTCGCAAGGATCAAAGGAGTTGGTTGGGGCTGGGCTGGTGTGATTTGGCTCTACAGCATCATCTTCTATATTCCTTTAGATGTGTTAAAGTTCATCATCCGATATTCATTGAGTGGCAAGGCCTGGAACAACATTACTGAGACACGGGTTGCTTTCACAACTAAGAAAGACTATGGAAGAGGAGAGAGAGAAGCACAATGGGCTGCAGATCAACGTACAATCCATGGTTTGAATCCTCCTGAAGCAGAAGATATCTTGAAGGACAAAACAGATTACAGAGAACTCACTGAAATTGCGGAACAAGCAAGGAAACGTGCTGAAGTTGCAAGGTTGAGGGAGCTTCACACACTGAAGGGGCATGTGGAATCTGTGGTGAAGCTGAAGGGACTTGATATTGAGACAATTCAGCAGCACTACACTGTGTGA 2730 0.4659 MADLEEIKKENVDLESKFLKFLGFMWNPLSWVMEAAALMAIALANGGGQPPDWQDFVGIVVLLFINSTISFIEENNAGNAAAALMANLAPKTKVRRDGAWVEQDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKNPGDEVFSGSTVKQGEIEAIVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVIEIVVMYPIQHRRYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKALVEVFEKDIDKDMLILLGARASRVENQDAIDACIVGMLGDPKEARDGIQEVHFLPFNPVDKRTAITYIDSAGNWHRVSKGAPEQIISLCNLRGDVLKRSHAIIDKFADRGLRSLAVCRQEVPEKTKESAGGPWHFVGLLPLFDPPRHDSAETIRKALGLGVNVKMITGDQLAIGKETGRRLGMGSNMYPSSSLLGEHKDESVAALPIDELIEKADGFAGVFPEHKYEIVKRLQDRKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKYDFSPFMVLIIAILNDGTIMTISKDRVKPSPIPDSWKLNEIFATGVVLGAYLAVMTVVFFWAAHASDFFTERFGVRSIRHSPEELTAAVYLQVSIVSQALIFVTRSRSWSYVERPGLLLLGAFLIAQLIATLLAVYANWEFARIKGVGWGWAGVIWLYSIIFYIPLDVLKFIIRYSLSGKAWNNITETRVAFTTKKDYGRGEREAQWAADQRTIHGLNPPEAEDILKDKTDYRELTEIAEQARKRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0741 909 SUPERFAMILY Calcium ATPase, transmembrane domain M 15 805 IPR023298 -
Lele41g0741 909 PRINTS H+-transporting ATPase (proton pump) signature 546 562 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele41g0741 909 PRINTS H+-transporting ATPase (proton pump) signature 718 739 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele41g0741 909 PRINTS H+-transporting ATPase (proton pump) signature 403 421 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele41g0741 909 PRINTS H+-transporting ATPase (proton pump) signature 577 602 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele41g0741 909 PRINTS H+-transporting ATPase (proton pump) signature 518 534 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele41g0741 909 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 59 307 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele41g0741 909 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 521 628 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele41g0741 909 Gene3D - 858 909 - -
Lele41g0741 909 SUPERFAMILY Calcium ATPase, transduction domain A 90 187 IPR008250 -
Lele41g0741 909 Gene3D - 299 446 IPR023299 GO:0000166
Lele41g0741 909 Gene3D - 284 583 IPR023214 -
Lele41g0741 909 Coils Coil 860 880 - -
Lele41g0741 909 PANTHER CALCIUM-TRANSPORTING ATPASE 15 841 - -
Lele41g0741 909 FunFam Plasma membrane ATPase 90 174 - -
Lele41g0741 909 Pfam haloacid dehalogenase-like hydrolase 283 560 - -
Lele41g0741 909 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 15 764 IPR006534 GO:0008553|GO:0016020|GO:0120029
Lele41g0741 909 SUPERFAMILY HAD-like 283 593 IPR036412 -
Lele41g0741 909 FunFam Plasma membrane ATPase 440 594 - -
Lele41g0741 909 FunFam Plasma membrane ATPase 299 446 - -
Lele41g0741 909 Gene3D - 90 174 - -
Lele41g0741 909 PRINTS P-type cation-transporting ATPase superfamily signature 441 452 - -
Lele41g0741 909 PRINTS P-type cation-transporting ATPase superfamily signature 137 151 - -
Lele41g0741 909 PRINTS P-type cation-transporting ATPase superfamily signature 546 565 - -
Lele41g0741 909 PRINTS P-type cation-transporting ATPase superfamily signature 287 301 - -
Lele41g0741 909 PRINTS P-type cation-transporting ATPase superfamily signature 569 581 - -
Lele41g0741 909 PRINTS P-type cation-transporting ATPase superfamily signature 463 473 - -
Lele41g0741 909 ProSitePatterns E1-E2 ATPases phosphorylation site. 289 295 IPR018303 -
Lele41g0741 909 SFLD p-type atpase 269 597 IPR044492 -
Lele41g0741 909 Gene3D - 52 773 - -
Lele41g0741 909 SFLD Haloacid Dehalogenase 269 597 - -
Lele41g0741 909 CDD P-type_ATPase_H 6 799 IPR006534 GO:0008553|GO:0016020|GO:0120029
Lele41g0741 909 FunFam ATPase 4 plasma membrane-type 531 773 - -
Lele41g0741 909 Pfam E1-E2 ATPase 88 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0741 Lele-ChrLele41 17339618 17343814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0741 14 909 Primary Pumps ATPases AT2G07560 83.929 0.0 1536