Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0735 ATGGACCTTCTTCAAAGATCAGAACCACCATGTTCATATGAAAATTTGAACTTCATCTCATTTTCTTCAGATGCAGCAGCATGCCCAAAACCCTCAATGGAGAGAGATTCACAGAAAGAAGATCATCAAACACACCTACATGACTCATCAGCTCCTCCTCCTCCTCCTCTTCTACTAAATCTAAATCTCTCTAATGAGGATTCTGCTGATGGATCAAAGCCAGAACTCAACCTCATCAATTGTTTTGATCATACCAAGTCATCCTTACACTCCTCAGAATCTTCTTCTCACGAGTTGGAACCGCGGATTTTCTCATGCAACTACTGCCAGAGGAAATTTTATAGTTCACAGGCCCTTGGAGGACACCAGAATGCACACAAGCGTGAGAGGACTTTGGAGAAAAGAGGACATAAAGTTGGAGCTGCAGCATCATTTTCAGTTGAATTTGGACAAAGGTACACTAGCATGGCTTCTCTTCCCTTGCATGGCTTATATAACAACAACAGATCACTTGGTATTCAAGCACATGCTATGATTCACAAGCCCTCTCATCAAGCTCCCATTCTCGGGTTACCGCGTTTCCATGGTAAAAATTCCTGGTGGAGGCAGCCTTTAGATTCACAACCAGCAATTGGGAAGCTTCCTTCTGCAAAAGTGCATATTGGAGATGAAACCGAAGCTTCCTTTTCCGGTGGAATTTCGAGGTTAGCTAAGTTTTCTCCAACTATGGTGGTGAAAGAAGGAATTGGAGCTTACTGGTTGGGAAGTGTTACTCATGTAAAATCTAAACAAGAGGAGTTGCAGAAGCTTGACTTGTCCCTCAAACTCTAA 831 0.4284 MDLLQRSEPPCSYENLNFISFSSDAAACPKPSMERDSQKEDHQTHLHDSSAPPPPPLLLNLNLSNEDSADGSKPELNLINCFDHTKSSLHSSESSSHELEPRIFSCNYCQRKFYSSQALGGHQNAHKRERTLEKRGHKVGAAASFSVEFGQRYTSMASLPLHGLYNNNRSLGIQAHAMIHKPSHQAPILGLPRFHGKNSWWRQPLDSQPAIGKLPSAKVHIGDETEASFSGGISRLAKFSPTMVVKEGIGAYWLGSVTHVKSKQEELQKLDLSLKL 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0735 276 ProSitePatterns Zinc finger C2H2 type domain signature. 106 126 IPR013087 -
Lele41g0735 276 MobiDBLite consensus disorder prediction 27 71 - -
Lele41g0735 276 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 8 276 IPR044246 GO:0009788
Lele41g0735 276 FunFam Zinc finger protein 2 82 151 - -
Lele41g0735 276 ProSiteProfiles Zinc finger C2H2 type domain profile. 104 131 IPR013087 -
Lele41g0735 276 SUPERFAMILY beta-beta-alpha zinc fingers 101 132 IPR036236 -
Lele41g0735 276 Gene3D Classic Zinc Finger 82 151 - -
Lele41g0735 276 MobiDBLite consensus disorder prediction 33 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0735 Lele-ChrLele41 17285131 17285961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0735 56 276 C2H2 Transcription Factor Family AT5G25160 45.798 2.59e-48 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele41g0735 None None None