Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0732 ATGTGGACTACCCCTGGTCCTTCTGTTTCATCGCCATCGTCTCGACAACCGTTGGGTGAAGGAGAGATGGGCAATGAGGAAACTCCAGCAACCCCAGGGACTTCTGGTGCTTCACTGTTTGGTAAAAAATCAATTCTCATGAACAAGTGTCTCATAGCTGAAGAATGGACCTTGGAAGAAGGAGGCTTACCCAAAGTCTCTTGCTCATTGCCTTCCCCTCCTGTCCCCCTAAGAAGGAAGGTAGGAGCTGAGTTTATAGGAACTTTAATTCTCATGTTTGCTAGTATTTCCACTGCTATTGTGAACCAAAGGACACAGGGTTCTGAGACTCTACTTGGCTGTGCTGCCTCTACTGGGCTTGCAGCTATGGTCGTCATCCTCGCCACCGGTCACATCTCTGGTGCTCATCTCAACCCTGCAGTCACCATTTCCTTTGCTGCTTTAAAGCACTTCCCATGGAAACATGTTCCTGTGTATATTGGCGCACAATTTAAGGCGTCCATGTGTGCAGCATTTGCATTGAAGGGGATATTTCACCCCTTCATGAGTGGAGGAGTCACAGTTCCTTCAGGAGGAAATGCTCAAGCTTTTGCTTTAGAGTTCATTATCAGCTTTAATCTCATGTTTGTTGTCACAGCAGTGGCCACCGACACAAGAGCTGTGGGGGAGCTTGCTGGAATTGCAGTGGGAGCGACTGTCATGTTCAACATACTTATAGCCGGGCCAGGAACAGGAGGATCAATGAACCCGGTGAGAACAATTGGTCCAGCCATTGCTACTAGTAACTACAAAGACATATGGGTCTACCTCATTGCTCCTATACTAGGAGCTCTTGGTGGGGCAGGGATCTACACTGCAGTCAAGCTTCCAGAAGCAGATGGTGAAACACAAGGAAACTCTTCAACACCCCGAAGCTTCAGAAAGTGA 927 0.4811 MWTTPGPSVSSPSSRQPLGEGEMGNEETPATPGTSGASLFGKKSILMNKCLIAEEWTLEEGGLPKVSCSLPSPPVPLRRKVGAEFIGTLILMFASISTAIVNQRTQGSETLLGCAASTGLAAMVVILATGHISGAHLNPAVTISFAALKHFPWKHVPVYIGAQFKASMCAAFALKGIFHPFMSGGVTVPSGGNAQAFALEFIISFNLMFVVTAVATDTRAVGELAGIAVGATVMFNILIAGPGTGGSMNPVRTIGPAIATSNYKDIWVYLIAPILGALGGAGIYTAVKLPEADGETQGNSSTPRSFRK 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0732 308 ProSitePatterns MIP family signature. 136 144 IPR022357 -
Lele41g0732 308 FunFam Aquaporin NIP2-1 67 299 - -
Lele41g0732 308 MobiDBLite consensus disorder prediction 1 18 - -
Lele41g0732 308 Pfam Major intrinsic protein 78 284 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele41g0732 308 MobiDBLite consensus disorder prediction 1 37 - -
Lele41g0732 308 Gene3D Glycerol uptake facilitator protein. 73 300 IPR023271 -
Lele41g0732 308 SUPERFAMILY Aquaporin-like 76 292 IPR023271 -
Lele41g0732 308 PANTHER AQUAPORIN NIP2-1 70 292 IPR034294 -
Lele41g0732 308 PRINTS Major intrinsic protein family signature 267 287 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele41g0732 308 PRINTS Major intrinsic protein family signature 155 174 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele41g0732 308 PRINTS Major intrinsic protein family signature 118 142 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele41g0732 308 PRINTS Major intrinsic protein family signature 79 98 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele41g0732 308 PRINTS Major intrinsic protein family signature 199 217 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele41g0732 308 PRINTS Major intrinsic protein family signature 230 252 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0732 Lele-ChrLele41 17267065 17270912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0732 23 308 Major Intrinsic Protein MIP AT1G80760 68.285 4.85e-139 393