Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0729 ATGCCTGCTGCCGCCACCGCTGCCCCTACCGCCGCCTCATCAGGTGCCGGCCAAACCGTCTGCGTCACAGGCGCCGGTGGCTTCATCGCCTCTTGGATTGTCAAGCTTTTCCTTGAGAGAGGCTACACTGTTAGAGGCACCGTCAGAAATCCAGATGATTCTAAGAACGCGCACTTGAAAGAGTTGGAAGGAGCACGGGAGAGGCTAACTCTTCATAAGGTTGATCTTCTTGATCTTGAGTCTGTGAAAGCTGTTATCAATGGCTGTGATGGCGTCATTCACACGGCTTCTCCCGTCACAGACAACCCCGAAGAGATGGTGGAGCCTGCAGTGAATGGAACAAAGAATGTGATCATCGCAGCTGCTGAAGCGAAAGTGCGAAGAGTAGTGTTCACGTCATCCATTGGAGCAGTCTACATGGACCCCAACAGAAACATTGATGAGGTGGTTGATGAGTCTTGCTGGAGCAATTTGGATTATTGCAAGAACACAAAGAATTGGTATTGCTATGGGAAGGCAGTGGCGGAGCAATCAGCATGGGATGAGGCAAAAACAAGAGGGGTGGATCTGGTTGTGGTGAATCCAGTTTTAGTGCTGGGACCATTGCTTCAATCCACCATAAATGCAAGCACAATTCACATCCTCAAGTATCTTACTGGCTCTGCTAAGACCTATGCAAATGCCACTCAGGCTTATGTACATGTTAAGGATGTTGCATTAGCCCATGTTCTTGTTTATGAGACTCCTTCTGCCTCCGGTCGTTATTTATGTTCCGAGAGATCCCTCCACCGAGGAGAACTGGTCGAGATCCTCGACAAGTACTTCCCAGAATACCCAATTCCTACCAAATGTTCGGACGAGAAGAATCCAAGAGCAAAACCCTACACATTCTCTAACAAGAGGCTGAAGGATTTAGGATTAGAGTTTACACCAGTTCATCAGTGTCTATACGACACCGTTAAGAGCCTGCAAGACAAAGGCCATCTTCCTCTTCCCACCAAGCAAGCAGAAGAATCTGTTGAGATTAAATCCTAG 1035 0.4821 MPAAATAAPTAASSGAGQTVCVTGAGGFIASWIVKLFLERGYTVRGTVRNPDDSKNAHLKELEGARERLTLHKVDLLDLESVKAVINGCDGVIHTASPVTDNPEEMVEPAVNGTKNVIIAAAEAKVRRVVFTSSIGAVYMDPNRNIDEVVDESCWSNLDYCKNTKNWYCYGKAVAEQSAWDEAKTRGVDLVVVNPVLVLGPLLQSTINASTIHILKYLTGSAKTYANATQAYVHVKDVALAHVLVYETPSASGRYLCSERSLHRGELVEILDKYFPEYPIPTKCSDEKNPRAKPYTFSNKRLKDLGLEFTPVHQCLYDTVKSLQDKGHLPLPTKQAEESVEIKS 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0729 344 CDD FR_SDR_e 20 307 - -
Lele41g0729 344 FunFam Cinnamoyl-CoA reductase 1 11 342 - -
Lele41g0729 344 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 16 323 IPR036291 -
Lele41g0729 344 Pfam NAD dependent epimerase/dehydratase family 20 251 IPR001509 -
Lele41g0729 344 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 19 320 - -
Lele41g0729 344 Gene3D - 10 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0729 Lele-ChrLele41 17228663 17231516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0729 17 283 Monolignol Biosynthesis Gene Families AT1G80820 76.404 1.33e-146 412