Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0728 ATGGAGAGAAAAGAGGCTTGCAGATTTTACATGATAGGAAATGCCTTTGCTCTCATGGTGGCTTTCCTCATAAATGTTTCCGTTACCTCCGTGAGTGGCGCTGTTTGCAATTCCTGGAATTTGAATGAGGAAGATCAAGTGAGCTGTCAGGATTTGGACTTGAACAAGGCCTCCTTTCTACTAAAAAATGTACTCGGTAAATGGAGTTCAAAACTGTTTGCAATCGCTTTGCTTGCTTCGGGTCAAAGTTCTACTATGACAGGAACATATGCAGGGCAATATGTCATGCAGATATCAGTTTTGACATGGATCATAGGTTCGCTGATAATGGCGATAAATATTTACTGCTTACTGATGGGCTTCATAAAGTTGCTTATTCATAGTGATTTGGAAATTGTGGGTAAGGTGTTTGTGGGGATTTTAGGGTTTTCAGCCATAGCCGTATATTTGGCCGGGATCGCTTATCTGGTGTTCCGCAACAAGAAGAAGGCAACACACCTTCTGGCACTAACAACCCCTGAAAATAGGCAAATGGAAAATGAACAAGGCAATGGATCAATGTATTCTCTCCCAAGAGAATACATAGCATGCAATTGCCTCAGAGAAGTAACTTAG 615 0.4163 MERKEACRFYMIGNAFALMVAFLINVSVTSVSGAVCNSWNLNEEDQVSCQDLDLNKASFLLKNVLGKWSSKLFAIALLASGQSSTMTGTYAGQYVMQISVLTWIIGSLIMAINIYCLLMGFIKLLIHSDLEIVGKVFVGILGFSAIAVYLAGIAYLVFRNKKKATHLLALTTPENRQMENEQGNGSMYSLPREYIACNCLREVT 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0728 204 Pfam Natural resistance-associated macrophage protein 4 141 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele41g0728 204 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 98 165 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0728 Lele-ChrLele41 17222849 17224928 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0728 4 196 Inorganic Solute Cotransporters AT1G15960 43.173 1.80e-52 174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0728 41 17222849 17224928 Lele37g0570 37 4713039 4716371 CCT
Lele41g0728 41 17222849 17224928 Lele38g0538 38 4499518 4503249 CCT
Lele41g0728 41 17222849 17224928 Lele39g0860 39 17530610 17533574 CCT
Lele41g0728 41 17222849 17224928 Lele43g0661 43 5900654 5903313 hybridization
Lele41g0728 41 17222849 17224928 Lele44g0617 44 4841255 4845205 hybridization