Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0727 ATGGCCAGAGTCAACGAACAGTCCCCGCATCAGAACCAGAACGACTCTCCCCGAAGCATTCTGTTCAACAAGTACGAGATGGGGAGGCTCCTGGGTCAAGGAAATTTCGCGAAAGTCTATTACGGCAGGAACCTTGTAACCAACGAGAGCGTCGCGATTAAGGTTATCAAGAAAGAGAAGCTCAAGAAAGAGAGGCTTATGAGGCAGATCAAGCAAGAGGTATCTGTGATGCGATTGGTTCGTCACCCTCACATCGTCGAGCTCAAGGAAGTTATGGCTACAAAAGGCAAAATCTTTCTAGTTATGGAGTATGTTAAAGGTGGAGAATTGTTCTCCAAGGTTGCCAAAGGCAAGCTTAAAGAAGATGTCGCCAGAAAATATTTCCAGCAATTGATTAGCGCCATTGATTTCTGTCACAGCCGTGGAGTCACGCATCGTGATCTGAAACCTGAGAATCTACTTTTGGACGAGAACGAAGATCTCAAGATTTCCGATTTTGGGTTGTCGGCGTTGCCGGAGCAGCGTCGATCCGACGGGATGCTCATCACGCCGTGTGGAACTCCGGCTTACGTGGCGCCGGAGGTGCTGAAGAAGAAAGGGTATGATGGATCGAAAGCTGATATTTGGTCATGTGGTGTGATTCTCTATGCTCTGCTTTCTGGGTATTTGCCATTTCAGGGTGAGAATATTATGAAGATTTATAAGAAAGCATTCAAAGCTGAGTACGAATTCCCAGATTGGATTTCACGGGAAGCTAAGAATTTGATCTCTAATCTTCTAGTCGCCGACCCAGAAAAGAGATACTCGATCCCAGATATCATGAAGGACCCATGGTTTCAAATTGGTTTCATGAGACCATTCGCGTTTTCGATAAAGAAGGAACCGGGTTTCGATTTCGACGAGGAGGAGAATAATAATAATAATAATGCAGTGAAAGATCAGAAAGAAGAAGGAGGAGGAGAAGCAGCAGCAGCAGTAACAAGATCAGAGAAACCATCTCGACCATTTTACAATGCGTTTGAGATAATCTCATCATTATCAAATGGGTTTGATCTGAGGAGCTTGTTCGAGACACGAAAGAGGTCGCCGTCGATGTTCCTGTCGAAGCTTTCGGCTCCGACGGTTGTGGCGAAACTGGAGACGGTGGCAAAGAAGCTGAATTTTAAGATCACAGGGAGGAAGGAGTACAAGGTGAGGATGCAGGGGGAAACAGAGGGAAGGAAGGGGAAGCTGGCCATGACGGTGGAGGTGTTCGAGGTGGCGCCGGAGGTGGCGGTGGTGGAATTCTCCAAGTCGGCCGGCGATACGTTCGAGTACACAAAATTCTGTGAGGAAGAAGTGAGGCCTGCCCTGAAAGACATAGTCTGGAGCTGGCAAGGAGATAGTACTACTACTACTAATAATAATAGTCATCAAAATTAA 1422 0.4669 MARVNEQSPHQNQNDSPRSILFNKYEMGRLLGQGNFAKVYYGRNLVTNESVAIKVIKKEKLKKERLMRQIKQEVSVMRLVRHPHIVELKEVMATKGKIFLVMEYVKGGELFSKVAKGKLKEDVARKYFQQLISAIDFCHSRGVTHRDLKPENLLLDENEDLKISDFGLSALPEQRRSDGMLITPCGTPAYVAPEVLKKKGYDGSKADIWSCGVILYALLSGYLPFQGENIMKIYKKAFKAEYEFPDWISREAKNLISNLLVADPEKRYSIPDIMKDPWFQIGFMRPFAFSIKKEPGFDFDEEENNNNNNAVKDQKEEGGGEAAAAVTRSEKPSRPFYNAFEIISSLSNGFDLRSLFETRKRSPSMFLSKLSAPTVVAKLETVAKKLNFKITGRKEYKVRMQGETEGRKGKLAMTVEVFEVAPEVAVVEFSKSAGDTFEYTKFCEEEVRPALKDIVWSWQGDSTTTTNNNSHQN 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0727 473 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Lele41g0727 473 SUPERFAMILY Protein kinase-like (PK-like) 21 280 IPR011009 -
Lele41g0727 473 Coils Coil 473 473 - -
Lele41g0727 473 Pfam Protein kinase domain 25 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0727 473 Pfam NAF domain 336 391 IPR004041 GO:0007165
Lele41g0727 473 Coils Coil 53 73 - -
Lele41g0727 473 Gene3D Kinase associated domain 1, KA1 336 457 - -
Lele41g0727 473 Gene3D Transferase(Phosphotransferase) domain 1 17 335 - -
Lele41g0727 473 ProSiteProfiles Protein kinase domain profile. 25 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0727 473 FunFam Non-specific serine/threonine protein kinase 18 322 - -
Lele41g0727 473 MobiDBLite consensus disorder prediction 300 327 - -
Lele41g0727 473 ProSiteProfiles NAF domain profile. 332 357 IPR018451 GO:0007165
Lele41g0727 473 ProSitePatterns Protein kinases ATP-binding region signature. 31 58 IPR017441 GO:0005524
Lele41g0727 473 MobiDBLite consensus disorder prediction 300 319 - -
Lele41g0727 473 FunFam Non-specific serine/threonine protein kinase 17 104 - -
Lele41g0727 473 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 10 453 - -
Lele41g0727 473 FunFam Non-specific serine/threonine protein kinase 332 456 - -
Lele41g0727 473 SMART serkin_6 25 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0727 473 CDD CIPK_C 338 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0727 Lele-ChrLele41 17203518 17204939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0727 18 470 CBL-interacting serine-threonine protein kinases AT5G10930 62.115 0.0 584
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele41g0727 Pkinase 2.1e-77 CL0016