Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0726 ATGGATTATTCATCATGGATTAACACTTCCTTGGACCTCAACCTTAACACTAGTTCCAGAGTCAACGAAGAGATTCCTAAAAAGGAGGTGGAAAGCAACTTTTTTGCATTAGAGTTGAAGTCATCGTCTCCTTCAAGACAAGAGACGAGTGGTGGTGATCTGGAGGAGGAATTGAAGAGGGTGAGTGCAGAAAACAAGAAGCTGACTGAAATGCTGACAGAGATGTGTGAGAACTACAATACTTTGAGGAACCACTTATCTGAATATATGAGAAACAACAACAACAACAACAACAATAATAATTCAGAAAAGGAGATGAGCGCACCAAAGAAGAGGAAATCTGAAAGCAGCAATGATAACAACAATAATAGCAATCCAATTGGGGTTTATGGGGGAAACAATAATAACTCTGAGAGCAGTTCAACTGATGAAGAATCAAGCAAGAAACCAAGGCATGAGATCATCAAAGCAAAAATCTCTAAATTTTATGTCAGAACTCCACCATCTGATACAACCCTTATTGTGAAAGATGGATACCAATGGAGGAAATATGGGCAAAAGGTGACCAGAGACAACCCTTGTCCAAGAGCATACTTCAAATGCTCTTTTGCTCCCTCATGCCCTGTCAAAAAGAAGGTTCAAAGAAGTGTGGAGGATCAATCCATTGTGGTGGCAACTTATGAAGGAGAGCATAATCATCAACAGCCTTCTCAAATGGAGGCAGCAGGGTCGGGTTCAAGTCGAGGCCTAGTACCGAGTTCAACGTATTCTATGAGGCCTTCTTCTTCTCCTCCAAAAGTTAAAGTTGACATGAAAAGGTCCAAATCCTTCCATGAATCCACAAACTCACTGCCAAAGCAAGATTCATCTGAAGTCCCTCAGGTTTTGGTGGAACAGATGGCCTCCTCGTTGACAAAGGATCCGAATTTCAGATCAGCACTTTTAGCAGCCATCTCAGGAAGAATGTTGAACAAGAATTAG 981 0.4139 MDYSSWINTSLDLNLNTSSRVNEEIPKKEVESNFFALELKSSSPSRQETSGGDLEEELKRVSAENKKLTEMLTEMCENYNTLRNHLSEYMRNNNNNNNNNNSEKEMSAPKKRKSESSNDNNNNSNPIGVYGGNNNNSESSSTDEESSKKPRHEIIKAKISKFYVRTPPSDTTLIVKDGYQWRKYGQKVTRDNPCPRAYFKCSFAPSCPVKKKVQRSVEDQSIVVATYEGEHNHQQPSQMEAAGSGSSRGLVPSSTYSMRPSSSPPKVKVDMKRSKSFHESTNSLPKQDSSEVPQVLVEQMASSLTKDPNFRSALLAAISGRMLNKN 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0726 326 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 34 322 IPR044810 GO:0003700
Lele41g0726 326 Pfam WRKY DNA -binding domain 176 234 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele41g0726 326 MobiDBLite consensus disorder prediction 229 293 - -
Lele41g0726 326 ProSiteProfiles WRKY domain profile. 170 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele41g0726 326 SUPERFAMILY WRKY DNA-binding domain 171 236 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele41g0726 326 SMART WRKY_cls 175 235 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele41g0726 326 MobiDBLite consensus disorder prediction 89 151 - -
Lele41g0726 326 MobiDBLite consensus disorder prediction 118 141 - -
Lele41g0726 326 Coils Coil 51 78 - -
Lele41g0726 326 MobiDBLite consensus disorder prediction 89 104 - -
Lele41g0726 326 Gene3D WRKY domain 161 237 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele41g0726 326 MobiDBLite consensus disorder prediction 229 262 - -
Lele41g0726 326 FunFam WRKY transcription factor 40 160 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0726 Lele-ChrLele41 17166374 17167777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0726 4 326 WRKY Transcription Factor Family AT1G80840 49.850 2.61e-91 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele41g0726 WRKY 7.5e-23 CL0274