Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0712 ATGTCAACTGCAACTGTGTATTTCCGTGCGCCAGCTAGTTTTGTGTTTCAAAATTGAGATAGTTACATAAATGGTTCACTTTCTCCATCCCTTTTCTCCAATTGCACACTGGAAATTTTGGAACTTTCTACCAACTTCCTCAGTGATGTAGAGAAAAATCTTTTATCTGGAGAATTGCCCTCAGAATTTGTAAGCAGATGTCCTGATCTTCTTTACCTGCATTTTTCATACAACCATATGGTAAGTCATGATCGTAATACCGATCTTTATCCATTTTTCGCCGCTCTTAGAAACTGCAGCCGTCTAGAGGAGCTTGAATTGGCCGGCATGGGCCTTGGAGGAAGCCTTATGATCCTGAATTTAACATCCAATCTTCTTAATGGAACTATTTCACCAGAGATCAGCATGTTGTTAAACTTGGAACAGCTTTTCTTATCAAACAACCACTTAAAATATGCAATTCCAGAAGCACTGGGCAACTGTCTAAATCTGGGTCTGCTTGATCTGTCGCGCAATGAATTTACGGGAGGGATTCCAGAAAGCTTGAGAAAGTTGGGTCGGTTATATTCTTTGTCTCTCAATAATAACCACCTCACAGGAAATGTACCTTCTACATTAGGACAGTGCATTGGTATGTATAGGCTTGACTTGTCCTATAATAGATTAACAGGAACCATCCCAACAGAAATCTCAGGCCTGCATGAAATTAGAATTTTGATAAACTTCTCACATAACCAACTAGAAGGTCCCCTGCCAATTGAGCTCAGCAAACTAGAAAATGTTCAAGAGATGGATTTTTCATCAAATTACCTAACTGGAAATATCTTCCTATCGATGATAAATTTTTCAAACAATTTTCTACTAGGTGAGCTTCCCGAATCTTTAGGCGAACTGAAGAACCTTGAAACTTTCGAGTCTGGATTGATCCCCAGAACTCTTTGTAAAACAGATACACTTTCTTTCCTCAATCTATCATATAATAACCTAGAAGGAATTGTTCCATCTGGTGTTTCAGATTTTGGGATTGCAAGGTTAATTATGAGTGTCGGAGGACGAAATACTGGATTTAATGATAACATGGGGAGCTCCACTGCAAATTTCTTATGTGGATCTATTGGATACATTGCACCAGAGTATGGATTTGGATCAAACACATCTACAAAAGGAGATGTGTACAGCTTCGGCATTCTTGTTCTTGAGATGGTGACAAGAAAAGGGCCAACAGATGACATGTTTTCTGGTGGCTTAAGCCTTCACAAATGGATGAGACTTCATTATCATGGAAGGTTAGAAAAAGTGATCGACCCTGCTTTGGTCACTGCTTCAAGAGATCAGTCACAGGAGGTGAAAAGAATGTGGGGAGTTGCAATTGGAGAGTTAATTGAGCTGGGGATCCTTTGCACAATGGAATCACCTTCTACAAGGCCTAGTATGCTTGATGTAGCAGACGACTTGGATCGTCTCAAGAGATACCATACTGGGGACACAACTAGAACTTTTGCATCATTTCTTGGAATTTCATCTTCTCCTATAGATGATTTTTAA 1545 0.3961 MSTATVYFRAPASFVFQNXDSYINGSLSPSLFSNCTLEILELSTNFLSDVEKNLLSGELPSEFVSRCPDLLYLHFSYNHMVSHDRNTDLYPFFAALRNCSRLEELELAGMGLGGSLMILNLTSNLLNGTISPEISMLLNLEQLFLSNNHLKYAIPEALGNCLNLGLLDLSRNEFTGGIPESLRKLGRLYSLSLNNNHLTGNVPSTLGQCIGMYRLDLSYNRLTGTIPTEISGLHEIRILINFSHNQLEGPLPIELSKLENVQEMDFSSNYLTGNIFLSMINFSNNFLLGELPESLGELKNLETFESGLIPRTLCKTDTLSFLNLSYNNLEGIVPSGVSDFGIARLIMSVGGRNTGFNDNMGSSTANFLCGSIGYIAPEYGFGSNTSTKGDVYSFGILVLEMVTRKGPTDDMFSGGLSLHKWMRLHYHGRLEKVIDPALVTASRDQSQEVKRMWGVAIGELIELGILCTMESPSTRPSMLDVADDLDRLKRYHTGDTTRTFASFLGISSSPIDDF 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0712 514 Gene3D Ribonuclease Inhibitor 218 277 IPR032675 -
Lele41g0712 514 SUPERFAMILY L domain-like 22 113 - -
Lele41g0712 514 SUPERFAMILY Protein kinase-like (PK-like) 337 496 IPR011009 -
Lele41g0712 514 Gene3D Ribonuclease Inhibitor 278 338 IPR032675 -
Lele41g0712 514 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 179 275 - -
Lele41g0712 514 Gene3D Ribonuclease Inhibitor 13 115 IPR032675 -
Lele41g0712 514 Gene3D Transferase(Phosphotransferase) domain 1 339 492 - -
Lele41g0712 514 Gene3D Ribonuclease Inhibitor 116 217 IPR032675 -
Lele41g0712 514 SUPERFAMILY L domain-like 115 335 - -
Lele41g0712 514 ProSiteProfiles Protein kinase domain profile. 102 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0712 514 PANTHER RECEPTOR-LIKE PROTEIN 55 188 337 - -
Lele41g0712 514 SMART LRR_typ_2 137 161 IPR003591 -
Lele41g0712 514 SMART LRR_typ_2 185 209 IPR003591 -
Lele41g0712 514 SMART LRR_typ_2 37 57 IPR003591 -
Lele41g0712 514 Pfam Protein tyrosine and serine/threonine kinase 337 430 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0712 Lele-ChrLele41 17048120 17052201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0712 337 496 Receptor kinase-like Gene Family AT3G56370 32.716 3.03e-11 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lele41g0712 PK_Tyr_Ser-Thr 6.1e-06 CL0016