Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0708 ATGTCACAGAGGAAGGTGAAGAACGCTGAAAACAGCATCACGCCTTCAAACACGAAGACGAAGCGGACTCGCAAAAGCATTCCCAGGGATTCTCCTCCGCAACGAAGCTCCGTTTATCGAGGCGTCACTAGGCATCGTTGGACGGGTCGGTATGAAGCTCATCTCTGGGATAAGAATTGCTGGAATGAATCACAGAGCAAGAAAGGGAGACAAGGGGCATATGATGATGAAGAAGCCGCAGCACGTGCCTATGACTTGGCAGCATTGAAGTACTGGGGTCAAGACACCATCCTCAACTTTCCTCTCACCAATTATGAAGAAGAGCTCAAGGAGATGGATGGCCAATCAAAAGAAGAATACATTGGATCCTTAAGAAGAAAAAGCAGTGGATTCTCACGAGGAGTCTCAAAATACAGAGGAGTAGCAAGACACCATCACAATGGAAGATGGGAAGCTCGCATTGGCAGAGTCTTCGGCAACAAATACCTGTATCTCGGAACTTACGCTACACAAGAAGAAGCAGCCACAGCATATGATATGGCAGCCATAGAATACAGAGGAGTCAACGCCGTTACAAACTTTGACCTCAGCCGTTACCTCAATTGTCTCCGTCCTCAAACACAAGAAGACTCCAGTGAAAACCCTACTACTGATAACAGCACCGAGTCTGCTGGATCAGACTCTTCTAAACCTGAACTTGAATTGGGTTTTGTGTCCCACCAGCTCAGTTCAAACTCCGACGACACGAAGGCGGCCCCTCCACGATCTGGTGGCGGGGCTCTGGCGTCGTCTGCACTAGGGCTCCTCTTGCAATCGTCAAAGTTTAAGGAAATGCTGGAGAGGACTTCATCAGCTGGAGACCATCATAGTTACCCTGCAACAACAACTTCAGAATCAAAGCTCCCTCGTCGTACATTTCCTGAAGATATTCAAACATTCTTTGATTGTCATGATTCATCAAGCAGCTACACTGAAACTGATGACATCATATTTGGTGATTTGAGCTCAATTGCTGATGCTCCAATTTTCCATTGCGAGCTGGATGCTTAG 1050 0.4724 MSQRKVKNAENSITPSNTKTKRTRKSIPRDSPPQRSSVYRGVTRHRWTGRYEAHLWDKNCWNESQSKKGRQGAYDDEEAAARAYDLAALKYWGQDTILNFPLTNYEEELKEMDGQSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGVNAVTNFDLSRYLNCLRPQTQEDSSENPTTDNSTESAGSDSSKPELELGFVSHQLSSNSDDTKAAPPRSGGGALASSALGLLLQSSKFKEMLERTSSAGDHHSYPATTTSESKLPRRTFPEDIQTFFDCHDSSSSYTETDDIIFGDLSSIADAPIFHCELDA 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0708 349 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 17 263 - -
Lele41g0708 349 SUPERFAMILY DNA-binding domain 136 197 IPR016177 GO:0003677
Lele41g0708 349 MobiDBLite consensus disorder prediction 205 231 - -
Lele41g0708 349 MobiDBLite consensus disorder prediction 287 301 - -
Lele41g0708 349 SUPERFAMILY DNA-binding domain 37 102 IPR016177 GO:0003677
Lele41g0708 349 Gene3D AP2/ERF domain 38 103 IPR036955 GO:0003700|GO:0006355
Lele41g0708 349 Gene3D AP2/ERF domain 136 197 IPR036955 GO:0003700|GO:0006355
Lele41g0708 349 PRINTS Ethylene responsive element binding protein signature 39 50 IPR001471 GO:0003700|GO:0006355
Lele41g0708 349 PRINTS Ethylene responsive element binding protein signature 177 197 IPR001471 GO:0003700|GO:0006355
Lele41g0708 349 SMART rav1_2 137 201 IPR001471 GO:0003700|GO:0006355
Lele41g0708 349 SMART rav1_2 38 107 IPR001471 GO:0003700|GO:0006355
Lele41g0708 349 FunFam AP2-like ethylene-responsive transcription factor 37 103 - -
Lele41g0708 349 CDD AP2 136 197 IPR001471 GO:0003700|GO:0006355
Lele41g0708 349 ProSiteProfiles AP2/ERF domain profile. 137 195 IPR001471 GO:0003700|GO:0006355
Lele41g0708 349 MobiDBLite consensus disorder prediction 1 21 - -
Lele41g0708 349 MobiDBLite consensus disorder prediction 205 228 - -
Lele41g0708 349 ProSiteProfiles AP2/ERF domain profile. 38 101 IPR001471 GO:0003700|GO:0006355
Lele41g0708 349 MobiDBLite consensus disorder prediction 279 304 - -
Lele41g0708 349 MobiDBLite consensus disorder prediction 1 41 - -
Lele41g0708 349 Pfam AP2 domain 37 93 IPR001471 GO:0003700|GO:0006355
Lele41g0708 349 Pfam AP2 domain 136 187 IPR001471 GO:0003700|GO:0006355
Lele41g0708 349 FunFam AP2-like ethylene-responsive transcription factor 136 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0708 Lele-ChrLele41 17004049 17007650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0708 34 199 AP2-EREBP Transcription Factor Family AT5G57390 71.598 9.87e-87 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lele41g0708 AP2 1.1e-09 CL0081