Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0693 ATGGAGCCGTCTATCTCTCGTAGCGCTAATTCCTCCACCAATGGCCTCCTCTCCGTCAACATCCCCGGTAGCAGCCACAACGATGTCGAACCCCTCCCTCCTCGGATCAACGACGACGACCACGACGACGATGAATTTATTGATCCTGATGATCCTTTCGACGTCACTCACACCAAGAATGCGCCGGCTGAGACACTCCAGCGATGGAGAGAAGCGACTCTAGTTCTCAATGCTTCCCGACGATTTAGATATACTCTGGACTTGAAAAATGGAGATGAGGAAGAGCATAAAAAAGGGTTGATAAGGGCCCATGCCCAAGTCGTACGAGCAGCGCTGCTTTTCAGATTAGCTGGTGAACGTGATCTAGGATCAGAACGTTTCAGCTTTGCAAGAATGTGGAGGGGAAAGTCTACTGTTAAAGGCTTGTTAGATTTACTAAAATCAGATCTTGAGAAAGGAATCAATGGAGATGACGATGATATGTTAAAAAGGAGAGTGACATTTGGAACGAATACATACCCTAAGAAAAAGGGGCGGAGTTTCTGGAATTTTCTATGGGATGCTTGGCAAGATCTGACCCTTATCATATTGATTATAGCAGCCGTGGTGTCATTGGCACTTGGAATAAAAACAGAGGGCTTGGAAGAAGGATGGTATGATGGAGGAAGCATTGCCTTTGCTGTTTTACTTGTCATCATAGTAACAGCTACCAGTGATTATCGCCAATCTCTGCAGTTTCAGAATTTGAATTCAGAAAAAGAAAATATACAATTGGAGGTCATTAGAGGCAGTAGAGCAACAAAGATATCAATATTTGATGTTGTTGTTGGTGATGTTGTACCTCTCAAAATAGGAGACCAGGTTCCTGCTGATGGAGTTATAATCACTGCTCACTCACTTGCCATTGATGAATCCAGTATGACTGGTGAAAGCAAGATTATTCACAAAGACTACAAATCACCTTTTTTGATGTCTGGCTGCAAAGTAGCAGATGGCGTTGGTGTTATGCTGGTAACTGGGGTTGGTATCAATACGGAGTGGGGATTGTTGATGGCAAGCATCTCTGAAGATACAGGAGAAGAGACTCCATTGCAGGTACGTTTGAATGGAGTTGCAACTTTTATCGGCATGATAGGTCTTACAGTAGCTGTTGTTGTGCTAGTGGTCCTATTGGCCAGATACTTTACTGGAAACACGAAAGATGTGGATGGAAATGTCCAATTTGTTGCTGGCCAGACGAGTATCAGTAGTGCAATAGATGGGGTTGTCAAAGTTTTTACTATTGCAGTCACAATTGTGGTTGTTGCAGTTCCTGAAGGTCTTCCATTGGCTGTTACCTTAACCCTGGCATACTCAATGCGGAAAATGATGGCAGACAAGGCCTTGGTGCGAAGGCTTTCGGCCTGTGAAACTATGGGCTGTGCAACAACAATTTGCAGTGATAAAACAGGAACGTTAACCTTGAATCAGATGACTGTGGTTGAGGCATGCGTTGGGAGGAAGAAACTGAATTCACCTGATGACTCATCAAAGTTGAATTCAGAAGTTTTATCTTTGATAAAAGAGGGCATTGCACAGAATACAACTGGAACTGTTTTTGTGCCTAAGGATGGTGGAGAGACTGAGGTTTCAGGGTCTCCTACAGAAAAGGCAATCCTTTCTTGGGCAGTTAAGTTGGGAATGGATTTTGATCTTATCAGATCAAATTCAACACCTCTCCATGTATTTCCCTTCAATTCTGAGAAAAAGCGAGGTGGTGTCTTGCTGAAGCAAAATGTGGACTCCACAGTACATATACATTGGAAAGGCGCTGCAGAGATAGTACTAGGAAAATGCACTCAATATCTTGATTCAAATGGTAGCTTGCTTTCTATTGAAGAAGAGAAGGACTTCTTCAATGCAGCCATTGAAGACATGGCTGCTCGCAGTTTGCGGTGTGTTGCCATTGCATACAGGTCATATGAATTGGACAAAGTTCCCTCTAATGAGGAGGATTTGGCCCAGTGGTCCTTACCTGAGGATGAGCTTGTTTTGCTTGCTATAGTTGGTATAAAGGATCCCTGTCGCCCTGGTGTCGAAGATGCAGTGGCAGTATGCACTGAAGCTGGTGTTAAGGTGCGCATGGTTACGGGAGACAATCTTCAAACGGCTAAGGCAATAGCTTTGGAGTGTGGTATACTGGCTTCACATTTAGATGCTGTTGAACCAGTTATCATTGAAGGAAAGACATTCCGGGAATTATCTGAACAAGAAAGGGAAGAAGTTGCTAAACAAATAACAGTGATGGGGAGGTCTTCTCCAAGTGACAAGCTTTTACTTGTTCAAGCACTGCGTAAAGGGGGTGAGGTTGTTGCTGTAACTGGAGATGGCACCAATGATGCTCCCGCACTTCATGAGGCAGATATTGGTCTTTCTATGGGCATTTCTGGAACTGAAGTCGCAAAAGAAAGTTCAGATATTATAATCCTGGATGACAACTTTGCGTCAGTTGTGAAGGTGGTCCGCTGGGGACGTTCTGTGTCTGCAAATATTCAGAAATTTATACAGTTCCAACTCACGGTTAATGTAGCAGCTCTTGCGATAAATGTTGTGGCAGCAGTTTCTTCGGGTGATGTTCCTTTAAATGCAGTGCAGCTTTTATGGCTTAACCTTATCATGGACACACTTGGGGCCCTGGCACTTGCTACGGAACCGCCTACTGACCACCTTATGCACAGACCACCAGTTGGTCGAAGGGAACCTCTCATAACGAATGACATGTGGAGGAACTTGCTTGTGCAGGCTGTATATCAAATTGCGGTTCTCCTTGTTCTTAATTTTGGTGGAGAAAGTATTCTCCGTGGTGACTCTGCAGCCGAAACCTTGCAACTGAAGAATACATTGATTTTCAATGCATTTGTCCTCTGCCAAATTTTCAACGAGTTCAATGCTCGAAAACCGGATCAAATGAACGTATTCACTGGAGTGACCAAGAACCGTCTCTTTGTGGGAATTGTGGGAATGACCGTTGTACTTCAGGTAATCATTATCGAGTTCCTTGGAAAGTTCACTAGCACGGTGAGGCTTGATTGGCAGATGTGGGTCGTTTCTATTATCATTGGTCTCGTCAGTTGGCCTCTTTCTGTGCTTGGAAAGTTCATTCCAGTTCCAAAAACACCATTGTCTAGCACTTTCAAGAAGATGCTTATACGATTCAAGAGATCAAAAACTCCTGCTCCTAATTAA 3225 0.4391 MEPSISRSANSSTNGLLSVNIPGSSHNDVEPLPPRINDDDHDDDEFIDPDDPFDVTHTKNAPAETLQRWREATLVLNASRRFRYTLDLKNGDEEEHKKGLIRAHAQVVRAALLFRLAGERDLGSERFSFARMWRGKSTVKGLLDLLKSDLEKGINGDDDDMLKRRVTFGTNTYPKKKGRSFWNFLWDAWQDLTLIILIIAAVVSLALGIKTEGLEEGWYDGGSIAFAVLLVIIVTATSDYRQSLQFQNLNSEKENIQLEVIRGSRATKISIFDVVVGDVVPLKIGDQVPADGVIITAHSLAIDESSMTGESKIIHKDYKSPFLMSGCKVADGVGVMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGMIGLTVAVVVLVVLLARYFTGNTKDVDGNVQFVAGQTSISSAIDGVVKVFTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGCATTICSDKTGTLTLNQMTVVEACVGRKKLNSPDDSSKLNSEVLSLIKEGIAQNTTGTVFVPKDGGETEVSGSPTEKAILSWAVKLGMDFDLIRSNSTPLHVFPFNSEKKRGGVLLKQNVDSTVHIHWKGAAEIVLGKCTQYLDSNGSLLSIEEEKDFFNAAIEDMAARSLRCVAIAYRSYELDKVPSNEEDLAQWSLPEDELVLLAIVGIKDPCRPGVEDAVAVCTEAGVKVRMVTGDNLQTAKAIALECGILASHLDAVEPVIIEGKTFRELSEQEREEVAKQITVMGRSSPSDKLLLVQALRKGGEVVAVTGDGTNDAPALHEADIGLSMGISGTEVAKESSDIIILDDNFASVVKVVRWGRSVSANIQKFIQFQLTVNVAALAINVVAAVSSGDVPLNAVQLLWLNLIMDTLGALALATEPPTDHLMHRPPVGRREPLITNDMWRNLLVQAVYQIAVLLVLNFGGESILRGDSAAETLQLKNTLIFNAFVLCQIFNEFNARKPDQMNVFTGVTKNRLFVGIVGMTVVLQVIIIEFLGKFTSTVRLDWQMWVVSIIIGLVSWPLSVLGKFIPVPKTPLSSTFKKMLIRFKRSKTPAPN 1074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0693 1074 Gene3D - 476 832 IPR023214 -
Lele41g0693 1074 FunFam Calcium-transporting ATPase 61 117 - -
Lele41g0693 1074 Pfam Cation transporter/ATPase, N-terminus 138 204 IPR004014 -
Lele41g0693 1074 FunFam Calcium-transporting ATPase 804 1051 - -
Lele41g0693 1074 Gene3D - 159 355 - -
Lele41g0693 1074 Gene3D - 489 687 IPR023299 GO:0000166
Lele41g0693 1074 FunFam Calcium-transporting ATPase 236 355 - -
Lele41g0693 1074 MobiDBLite consensus disorder prediction 1 25 - -
Lele41g0693 1074 SUPERFAMILY Calcium ATPase, transduction domain A 258 352 IPR008250 -
Lele41g0693 1074 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 137 1049 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Lele41g0693 1074 Pfam Cation transporting ATPase, C-terminus 872 1046 IPR006068 -
Lele41g0693 1074 FunFam Calcium-transporting ATPase 9 plasma membrane-type 333 503 - -
Lele41g0693 1074 SFLD C1.7: P-type atpase like 461 839 - -
Lele41g0693 1074 SMART Cation_ATPase_N_a_2 132 209 IPR004014 -
Lele41g0693 1074 Gene3D - 187 1045 - -
Lele41g0693 1074 MobiDBLite consensus disorder prediction 1 44 - -
Lele41g0693 1074 Gene3D - 63 115 - -
Lele41g0693 1074 PANTHER CATION TRANSPORTING ATPASE 130 1049 - -
Lele41g0693 1074 PRINTS Sodium/potassium-transporting ATPase signature 472 493 - -
Lele41g0693 1074 PRINTS Sodium/potassium-transporting ATPase signature 599 617 - -
Lele41g0693 1074 PRINTS Sodium/potassium-transporting ATPase signature 222 242 - -
Lele41g0693 1074 Pfam E1-E2 ATPase 257 457 - -
Lele41g0693 1074 SFLD p-type atpase 461 839 IPR044492 -
Lele41g0693 1074 FunFam Calcium-transporting ATPase 489 687 - -
Lele41g0693 1074 SUPERFAMILY Calcium ATPase, transmembrane domain M 138 1049 IPR023298 -
Lele41g0693 1074 FunFam Calcium-transporting ATPase 187 244 - -
Lele41g0693 1074 Pfam Ca2+-ATPase N terminal autoinhibitory domain 50 89 IPR024750 GO:0005516
Lele41g0693 1074 CDD P-type_ATPase_Ca_PMCA-like 163 920 - -
Lele41g0693 1074 PRINTS P-type cation-transporting ATPase superfamily signature 303 317 - -
Lele41g0693 1074 PRINTS P-type cation-transporting ATPase superfamily signature 479 493 - -
Lele41g0693 1074 PRINTS P-type cation-transporting ATPase superfamily signature 811 823 - -
Lele41g0693 1074 PRINTS P-type cation-transporting ATPase superfamily signature 702 712 - -
Lele41g0693 1074 PRINTS P-type cation-transporting ATPase superfamily signature 787 806 - -
Lele41g0693 1074 PRINTS P-type cation-transporting ATPase superfamily signature 680 691 - -
Lele41g0693 1074 Pfam haloacid dehalogenase-like hydrolase 476 801 - -
Lele41g0693 1074 SUPERFAMILY HAD-like 477 892 IPR036412 -
Lele41g0693 1074 FunFam Calcium-transporting ATPase 680 832 - -
Lele41g0693 1074 ProSitePatterns E1-E2 ATPases phosphorylation site. 481 487 IPR018303 -
Lele41g0693 1074 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 415 510 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele41g0693 1074 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 753 867 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele41g0693 1074 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 486 684 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0693 Lele-ChrLele41 16863780 16877545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0693 9 1069 Primary Pumps ATPases AT3G21180 72.861 0.0 1560