Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0682 ATGCAAACTTCAATACTTCTCGTCCCCAATAAAGATACACTTAGTAGCATGGCAGGATGTGTGCAAGGAGAAATCGAAAGGTTGTCTGAGAGTAAGATGTTTGAAGGCTTAGAATCAAACTTTACTACTAAAATTCGGATGGGATCTCATCAATCAAAAAGATTCTCCGCTGATAATCTGGCCAAGGGAGCACTTGCGGAAGCTTTGGGATCCTATCTTCTTCCCTCACTAGAAGCCTTTTTTGATGGCTCTATTCCTTGTTCATCGTCTGTCTTCCGATCCAGTCTCTGCCTGAAAATGCCGGCTGTGTACGGAGCTCGCCTGACCACCTTCGAAGACTCCGAGAAGGAGAGTGAATATGGTTACGTTCGTAAGGTATCAGGACCAGTCGTGGTTGCAGATGGCATGGCTGGAGCTGCTATGTATGAACTAGTGCGTGTTGGTCGTGACAACCTCATTGGTGAAATTATTCGTTTGGAAGGGGATTCTGCTACTATCCAAGTTTATGAGGAAACAGCTGGCTTAATGGTCAATGATCCTGTCTTACGAACACACAAGCCTTTATCAGTGGAGTTGGGGCCTGGAATATTGGGAAATATTTTTGATGGAATTCAGAGGCCATTGAAAACTATTGCTAAACGATCTGGTGATGTCTACATTCCTCGTGGTGTCTCTGTTCCAGCACTTGATAAAGATACACTCTGGGAGTTTCAGCCTAAAAAAATTGGTGAAGGAGACCTATTAACTGGTGGAGATCTCTATGCTACTGTTTTTGAGAACAGTCTAATGCAGCACCACATTGCACTTCCTCCTGATGCTATGGGAAAAATTACTTACATAGCACCACCTGGACAATATTCCTTGAAGGATACTGTATTGGAGCTTGAGTTTCAAGGTGTTAAAAAACAGTTCACCATGCTCCAGACTTGGCCTGTTCGTACACCAAGGCCTGTTGCATCAAAACTTGCGGCTGATACTCCTCTGCTCACTGGTCAGCGTGTTCTTGATGCCCTCTTCCCCTCTGTTCTTGGTGGGACTTGTGCTATTCCTGGGGCTTTTGGTTGTGGCAAAACTGTCATCAGTCAGGCTCTTTCTAAGTATTCCAACTCTGATACTGTTGTCTATGTTGGTTGTGGGGAACGTGGAAATGAAATGGCTGAAGTTCTTATGGACTTTCCACAACTTACAATGACATTGCCTGATGGTCGTGAAGAATCTGTCATGAAGCGTACAACACTGGTGGCTAACACTTCGAACATGCCTGTGGCTGCTCGTGAGGCTTCAATTTATACAGGAATTACTCTAGCTGAGTATTTTAGAGATATGGGTTACAATGTCAGCATGATGGCAGATTCAACTTCTAGATGGGCAGAAGCATTGCGTGAAATTTCTGGACGGCTGGCAGAAATGCCTGCTGATAGTGGATATCCTGCTTACCTTGCTGCACGTTTAGCTTCTTTCTATGAACGTGCTGGCAAAGTAAAATGCCTTGGAGGTCCTGAACGCACTGGTAGTGTCACAATTGTTGGTGCTGTTTCTCCGCCAGGAGGAGATTTCTCAGATCCTGTGACATCTGCAACCCTCAGCATAGTTCAGGTTTTCTGGGGTTTGGACAAAAAGCTTGCCCAGAGGAAGCATTTCCCTTCTGTTAACTGGCTTATTTCCTATTCAAAGTATGCTACGGCTTTAGAATCATTCTACGAGCAATTTGATCCAGATTTTATTAACATTAGGACAAAGGCTCGTGAAGTTTTACAGAGAGAAGATGACCTGAATGAAATTGTCCAGCTTGTTGGAAAGGATGCTTTGGCTGAAGGAGATAAGATCACCTTGGAAACTGCAAAGCTTTTGAGAGAGGATTATCTTGCTCAGAATGCTTTTACTCCATATGACAAATTCTGTCCCTTCTACAAGTCCGTTTGGATGATGCGGAACATCATCCATTTCTACAATTTGGCAAATCAGGCAGTAGAGAGAGGAGCTGGCACAGATGGTCAAAAGATAACTTACACCCTCATCAAGCATCGCTTGGGGGATCTCTTCTACCGTTTAGTGTCTCAGAAATTTGAGGATCCAGCAGAAGGTGAAGCAGCTCTGGTTGAAAAATTTAAGAAATTACATGAGGACCTGACTAATGGTTTCCGCAACCTCGAGGACGAAACCCGATGA 2169 0.4417 MQTSILLVPNKDTLSSMAGCVQGEIERLSESKMFEGLESNFTTKIRMGSHQSKRFSADNLAKGALAEALGSYLLPSLEAFFDGSIPCSSSVFRSSLCLKMPAVYGARLTTFEDSEKESEYGYVRKVSGPVVVADGMAGAAMYELVRVGRDNLIGEIIRLEGDSATIQVYEETAGLMVNDPVLRTHKPLSVELGPGILGNIFDGIQRPLKTIAKRSGDVYIPRGVSVPALDKDTLWEFQPKKIGEGDLLTGGDLYATVFENSLMQHHIALPPDAMGKITYIAPPGQYSLKDTVLELEFQGVKKQFTMLQTWPVRTPRPVASKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITLAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYATALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVERGAGTDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEAALVEKFKKLHEDLTNGFRNLEDETR 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0682 722 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 301 561 IPR027417 -
Lele41g0682 722 CDD V_A-ATPase_A 187 559 - -
Lele41g0682 722 Gene3D - 558 711 IPR024034 -
Lele41g0682 722 FunFam V-type proton ATPase catalytic subunit A 293 556 - -
Lele41g0682 722 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 570 652 - -
Lele41g0682 722 CDD ATP-synt_V_A-type_alpha_N 120 186 - -
Lele41g0682 722 FunFam V-type proton ATPase catalytic subunit A 119 188 - -
Lele41g0682 722 Gene3D - 119 188 IPR023366 -
Lele41g0682 722 SUPERFAMILY N-terminal domain of alpha and beta subunits of F1 ATP synthase 116 188 IPR036121 GO:0046034|GO:1902600
Lele41g0682 722 Pfam ATPsynthase alpha/beta subunit N-term extension 201 322 IPR031686 -
Lele41g0682 722 Gene3D - 190 556 IPR027417 -
Lele41g0682 722 Hamap V-type ATP synthase alpha chain [atpA]. 118 721 IPR022878 GO:0046034|GO:0046961
Lele41g0682 722 Gene3D - 233 304 - -
Lele41g0682 722 FunFam V-type proton ATPase catalytic subunit A 233 304 - -
Lele41g0682 722 Coils Coil 700 720 - -
Lele41g0682 722 TIGRFAM V-ATPase_V1_A: V-type ATPase, A subunit 119 710 IPR005725 GO:0033180|GO:0046961|GO:1902600
Lele41g0682 722 CDD ATP-synt_V_A-type_alpha_C 574 680 - -
Lele41g0682 722 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 331 557 IPR000194 GO:0005524
Lele41g0682 722 ProSitePatterns ATP synthase alpha and beta subunits signature. 548 557 IPR020003 GO:0005524
Lele41g0682 722 FunFam V-type proton ATPase catalytic subunit A 558 711 - -
Lele41g0682 722 Pfam ATP synthase alpha/beta family, beta-barrel domain 124 184 IPR004100 GO:0046034|GO:1902600
Lele41g0682 722 PANTHER V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A 108 720 IPR022878 GO:0046034|GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0682 Lele-ChrLele41 16765461 16773169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0682 100 722 Primary Pumps ATPases(2) AT1G78900 93.900 0.0 1217