Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0660 ATGGATCCAGTAGCTGCTCAAGGTCGTCCTCTTCCACCACCTTTTCTCACCAGAGATCTTCATCTTCATCCCCATCATCAATTTCAGAGCCACCATAATAACAACCGCTCCACCGCCGCCGCCGACGATGAGCAGGTCGGTAATGGCAGCTTGAACCTTGGTCAGAAGCGAGATCACGAGAATACCGTCACTGAGGGGAAGGAATTATTGGGTTCTAACACAGCTTCTGCCGGTGACGGTGCCGGAGGTGGCGGTGGGGATAATAGTGGTAGAAGGCCTCGTGGAAGACCCGCCGGTTCGAAGAACAAGCCTAAGCCTCCGATCATCATAACGAGGGATAGCGCCAACGCGCTTAGGTCCCATGTCATGGAGATCGCAAACGGCGGAGATATCATGGATAGTGTCGCCGCCTTCGCGCGGCGGAGGCAGCGTGGGGTTTGCATTCTCAGTGGAAGTGGCACCGTCACGAATGTCACCCTCCGGCAGCCCGCTTCACCCGGTGCAGTTGTCACCTTATATGGGAGATTTGAGATTCTATCACTGTCCGGCTCGTTCCTGCCTCCACCAGCACCACCAGCCGCTTCGGCGCTGGCCATATATCTCTCCGGCGGACAGGGTCAAGTCGTCGGAGGCACCGTGGTGGGACCCTTGATGGCATCAGGGCCAGTGGTCATTATGGCGGCTTCGTTCGGAAATGCGGCGTACGAGAGGCTGCCGTTGGAGGAGGAGGATACGCCAGTGCCGGTGAGCGGAAGCGGAGGGTTAGGCTCGCCGGGAGGAATTGTGGGACAACAGCAACAATCACAGAATCAACAGCAACAAATCGTCGGAGATCCTAACACACCACCATCAATGTTTCATGGAGTTCCTCAGAATCTTATGAATTCTTGCCAATTACCAGCTGAAGGATTCTGGGGTGGAGGCAGCACCGTTCGTCCTCCATTCTAA 948 0.5591 MDPVAAQGRPLPPPFLTRDLHLHPHHQFQSHHNNNRSTAAADDEQVGNGSLNLGQKRDHENTVTEGKELLGSNTASAGDGAGGGGGDNSGRRPRGRPAGSKNKPKPPIIITRDSANALRSHVMEIANGGDIMDSVAAFARRRQRGVCILSGSGTVTNVTLRQPASPGAVVTLYGRFEILSLSGSFLPPPAPPAASALAIYLSGGQGQVVGGTVVGPLMASGPVVIMAASFGNAAYERLPLEEEDTPVPVSGSGGLGSPGGIVGQQQQSQNQQQQIVGDPNTPPSMFHGVPQNLMNSCQLPAEGFWGGGSTVRPPF 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0660 315 PIRSF ESCAROLA 16 315 IPR014476 GO:0003680
Lele41g0660 315 Gene3D - 118 246 - -
Lele41g0660 315 CDD DUF296 119 185 IPR005175 -
Lele41g0660 315 MobiDBLite consensus disorder prediction 259 288 - -
Lele41g0660 315 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 37 296 IPR014476 GO:0003680
Lele41g0660 315 SUPERFAMILY AF0104/ALDC/Ptd012-like 115 248 - -
Lele41g0660 315 MobiDBLite consensus disorder prediction 243 288 - -
Lele41g0660 315 MobiDBLite consensus disorder prediction 25 109 - -
Lele41g0660 315 FunFam AT-hook motif nuclear-localized protein 118 245 - -
Lele41g0660 315 MobiDBLite consensus disorder prediction 31 57 - -
Lele41g0660 315 ProSiteProfiles PPC domain profile profile. 115 251 IPR005175 -
Lele41g0660 315 Pfam Plants and Prokaryotes Conserved (PCC) domain 119 231 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0660 Lele-ChrLele41 16550656 16551603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0660 1 315 AT-hook Motif Nuclear Localized (AHL) Family AT2G45430 62.349 1.18e-84 256