Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0657 ATGAGTACAAGCTCGGCCAGTAACGTTACTGGTAGTGTTGGTGGGGGTGGTAGTGGTGGGAGCTGCAGCGGCGGCGGAGGTGGTGGTGGAAGTGGCGGCGGTGGAGGGCCGTGCGGTGCCTGCAAGTTTCTGAGAAGGAAGTGCGTGCCAGGGTGTATCTTCGCGCCGTATTTCGACTCCGAGCAAGGGGCGACGCACTTCGCGGCGGTGCATAGGGTGTTCGGAGCGAGCAACGTGTCGAAGCTGCTTCTGAATATTCCGGTGCACAAGCGGCTGGACGCGGTGGTGACGATTTGCTTCGAGGCTCAGGCACGGCTGAGAGATCCTGTGTATGGATGTGTCGCCAACATCTTCGCTCTTCAGCAACAGGTTGTGAATCTACAAGCAGAACTTTCTTACTTGCAAGGTCACCTTGCTGCATTAGAATTGCCCCAACCGCCACCTCCTCCACTGTCACAAGCGCCGTCGGCAGTGACAACTCTCTCCATTGGCCACATCCCGTCTGGCATAGCCTCTTCTCTCCCACTCACATATGATTTGTCTTCTCTCTTCGATCCAATGGCCCAAACTTCTTGGGCCCCGCCACAACGGCCCATATTGGACCTGCGCCAATATGGGCCTACCAGCTCACCGTCAGTAGGAGGCGGCGGCGGCGGCGGTGATCTTCATGCCCTAGCAAGAGAACTGATCAACATACACGGGTCTCCTCCATCTTCATCAGCACCTATGGCTTGCTCAAAAGCCTCCCCTTCATCTCCATCACTTTCCAAATGA 774 0.5672 MSTSSASNVTGSVGGGGSGGSCSGGGGGGGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGATHFAAVHRVFGASNVSKLLLNIPVHKRLDAVVTICFEAQARLRDPVYGCVANIFALQQQVVNLQAELSYLQGHLAALELPQPPPPPLSQAPSAVTTLSIGHIPSGIASSLPLTYDLSSLFDPMAQTSWAPPQRPILDLRQYGPTSSPSVGGGGGGGDLHALARELINIHGSPPSSSAPMACSKASPSSPSLSK 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0657 257 Pfam Lateral organ boundaries (LOB) domain 37 135 IPR004883 -
Lele41g0657 257 ProSiteProfiles LOB domain profile. 36 138 IPR004883 -
Lele41g0657 257 MobiDBLite consensus disorder prediction 198 257 - -
Lele41g0657 257 PANTHER LOB DOMAIN CONTAINING PROTEIN 35 143 - -
Lele41g0657 257 MobiDBLite consensus disorder prediction 233 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0657 Lele-ChrLele41 16493200 16498148 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0657 38 237 AS2 family AT2G45420 64.623 3.82e-78 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele41g0657 LOB 1.4e-37 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0657 41 16493200 16498148 Lele43g0734 43 6700711 6705485 hybridization
Lele41g0657 41 16493200 16498148 Lele44g0690 44 5798158 5803380 hybridization