Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0656 ATGGATTATGGGTGTAGTAAGAATGATAACAATGGTTATGGTGGTGGTAGGGATGGTGATCGTGGTGGTCAGAGACCTTGTGGGGCGTGCAAGTTCCTGAGAAGAAAGTGCGTGAAGGGATGTGTATTTGCACCCTACTTCGACTCCGATCAAGGCACGGCTCACTTCGCGGCGGTGCACAGGGTGTTCGGAGCCAGCAACGCCGCCAAGCTTCTGCTGAGAATCCCTCCTCACCACCGTCTCGACGCCGTCCTCACTCTCTCCTACGAGGCTCTCTCTAGGGCTCGAGATCCCGTCTATGGCTGCGTCGCCCACATCTTCACCCTTCAACAACAGGTGATGAACTTGCAGGCTGAGTTAGCTTATGTGCAAGCTCGTCTTTCGACGTTGCAGTGTCTCCCGACGGCGGCGGAGGTTGCAACTCTTCCTCAGCCGGAAACCTCCTCGAACAATGAGTTTCCCTTCGATCCAACTAATTCACTTTATCAGTTCTCAACTTTCCTCAACCCTTGTGATCTTCAACACGATGGGGATCTTCAAGCTCTAGCCAGAGATTTTGTATCAAGGTAA 570 0.5246 MDYGCSKNDNNGYGGGRDGDRGGQRPCGACKFLRRKCVKGCVFAPYFDSDQGTAHFAAVHRVFGASNAAKLLLRIPPHHRLDAVLTLSYEALSRARDPVYGCVAHIFTLQQQVMNLQAELAYVQARLSTLQCLPTAAEVATLPQPETSSNNEFPFDPTNSLYQFSTFLNPCDLQHDGDLQALARDFVSR 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0656 189 Pfam Lateral organ boundaries (LOB) domain 26 124 IPR004883 -
Lele41g0656 189 ProSiteProfiles LOB domain profile. 25 127 IPR004883 -
Lele41g0656 189 PANTHER LOB DOMAIN CONTAINING PROTEIN 24 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0656 Lele-ChrLele41 16474397 16479289 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0656 29 189 AS2 family AT2G45410 62.195 6.24e-65 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele41g0656 LOB 2.8e-36 No_clan