Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0654 ATGGAAGCGAGAGAAGGAATTAGTTCAGGGGTTACGGTAATTGGAGCAGAAGCTCCATCAGCCTATCATATGGCACCAAGAACTGAAGCACCAAGCCAGAATCAAGTTCCTGAAGTACTAGCAACAGCACCAGCGGCACCAAATATTGGTGCCTCGCCAGTGAGTGTGGGAATGGATGGAACAGCAGTCAAGAAGAAACGAGGTAGACCAAGGAAGTATGGTCCCGACGGTTCTGTGGCCATGGCATTGTCACCTTTGCCAATTTCATCTTCAGCTCCACTTTCCAATGACTTCTCATCTGGGGGGAAGCGGGGCAAATCGGCAGGAATGGAGTACAAGAAACATAAGAAACTTGGATTGGATCATTTGGGTGATTTGAATGCCTGCTCACTTGGAACAAACTTCATGCCTCATATAATCACAGTCAACACAGGCGAGGATATTACAATGAAGGTTATATCTTTTTCTCAACAAGGACCCCGGGCTATATGCATCCTCTCTGCTACTGGTGTGATTTCTAATGTTACACTACGTCAGCCTGATTCTTCAGGGGGTACTTTGACGTATGAGGGTCGCTTTGAGATACTATCACTGTCTGGATCATTCATGCCTACTGAGAACCAAGGAACAAGAAGCAGGTCAGGTGGAATGAGCGTCTCTTTGGCAAGCCCTGACGGTCGAGTTGTAGGCGGTGGAGTTGCTGGTCTTCTTATTGCTGCCAGTCCTGTGCAGGTGGTGGTGGGAAGTTTTCTACCAGGCAATCATCAAGACCCGAAACCAAAGAAGTCCAAATCTGACTATGCGCCACCGGCTAGTATTACCCCGCCACCCGTCCCCGTTTCTACTGCACCACCCTCAACTAATGCTGAAAAAGAAGATGGCTTGGGTGGCGGTGGACATGTCCTGCAAAATTCTGGAGACCTGAATTCCAACATGACATCTCCTTCAGCATTCCGACGAGAAAACTGGGTGAACATGCACTCTATGCCAGATTTGAGACAGTCGGCTACGGACATTAACATCTCCCTGCCAGATAGTTAA 1041 0.4832 MEAREGISSGVTVIGAEAPSAYHMAPRTEAPSQNQVPEVLATAPAAPNIGASPVSVGMDGTAVKKKRGRPRKYGPDGSVAMALSPLPISSSAPLSNDFSSGGKRGKSAGMEYKKHKKLGLDHLGDLNACSLGTNFMPHIITVNTGEDITMKVISFSQQGPRAICILSATGVISNVTLRQPDSSGGTLTYEGRFEILSLSGSFMPTENQGTRSRSGGMSVSLASPDGRVVGGGVAGLLIAASPVQVVVGSFLPGNHQDPKPKKSKSDYAPPASITPPPVPVSTAPPSTNAEKEDGLGGGGHVLQNSGDLNSNMTSPSAFRRENWVNMHSMPDLRQSATDINISLPDS 346
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0654 346 Pfam Plants and Prokaryotes Conserved (PCC) domain 137 250 IPR005175 -
Lele41g0654 346 SUPERFAMILY AF0104/ALDC/Ptd012-like 135 254 - -
Lele41g0654 346 Gene3D - 137 265 - -
Lele41g0654 346 CDD DUF296 137 250 IPR005175 -
Lele41g0654 346 ProSiteProfiles PPC domain profile profile. 132 271 IPR005175 -
Lele41g0654 346 FunFam AT-hook motif nuclear-localized protein 1-like 137 267 - -
Lele41g0654 346 MobiDBLite consensus disorder prediction 251 316 - -
Lele41g0654 346 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 32 314 IPR039605 GO:0003680
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele41g0654 Lele-ChrLele41 16454534 16459641 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0654 10 283 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 57.049 7.25e-101 300