Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele41g0633 | ATGGCTCTCACTTCCCAACTTGTTCATCGCTTGCTCTCTCTCTCACTTTTCTTCTCCATTTTTCTGGTCACTGCTTCTTCTTGCTTCATCCCTAGAAAGCTCCTTAATTCATCTTCTTCTTACACTTCTGGTTCTGACTGGTCTCCAGCCGAGGCCACTTGGTACGGAAGCCCCACCGGCGCCGGAAGTGATGGTGGTGCATTTGGATATACTAGTGCTGTGGAGCAACCTCCATTTTCGTCGATAATATCCGCAGGAGGGCCTACTTTGTATGAATCAGGGAAAGGCTGTGGAGCTTGTTATGAGGTGAAATGCACTGAGAATTCTGTGTGCTCCGGCCAGCCCGTAGAGATTCAACACAGAAGAGTGAAATGCAACTATCGTGGCACCTCATTAGCGTTCCACGTGGACTCAGGCTCGAACGAGAACTACTTCGCATGTTTGATAGAGTACGAGGACGGTGACGGAGATCTGGCCAAGGTGGAATTGAAGGAGGCTCTGGATTCTGCCACGTGGACTCCGATGCAACAGTCGTGGGGCGACGTCTGGAAGATCAACACCGGAGCTTCGCTCAAAGCCCCCTTCTCCCTCCGCCTCACCTCCATCGATATTTATCTACCTAGGGATCCTGATGATGATGAAGGTGATCATGAAGTGCTGGTACTATCATATTAG | 675 | 0.5022 | MALTSQLVHRLLSLSLFFSIFLVTASSCFIPRKLLNSSSSYTSGSDWSPAEATWYGSPTGAGSDGGAFGYTSAVEQPPFSSIISAGGPTLYESGKGCGACYEVKCTENSVCSGQPVEIQHRRVKCNYRGTSLAFHVDSGSNENYFACLIEYEDGDGDLAKVELKEALDSATWTPMQQSWGDVWKINTGASLKAPFSLRLTSIDIYLPRDPDDDEGDHEVLVLSY | 224 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele41g0633 | 224 | SUPERFAMILY | PHL pollen allergen | 131 | 203 | IPR036749 | - | |
| Lele41g0633 | 224 | ProSiteProfiles | Expansin, Cellulose-binding-like domain profile. | 143 | 224 | IPR007117 | - | |
| Lele41g0633 | 224 | Pfam | Expansin C-terminal domain | 133 | 201 | IPR007117 | - | |
| Lele41g0633 | 224 | PANTHER | EXPANSIN-B3 | 22 | 118 | - | - | |
| Lele41g0633 | 224 | Gene3D | - | 134 | 205 | IPR036749 | - | |
| Lele41g0633 | 224 | ProSiteProfiles | Expansin, family-45 endoglucanase-like domain profile. | 65 | 118 | IPR007112 | - | |
| Lele41g0633 | 224 | Gene3D | - | 32 | 133 | IPR036908 | - | |
| Lele41g0633 | 224 | PRINTS | Expansin/Lol pI family signature | 46 | 61 | IPR007118 | GO:0005576 | |
| Lele41g0633 | 224 | PRINTS | Expansin/Lol pI family signature | 87 | 105 | IPR007118 | GO:0005576 | |
| Lele41g0633 | 224 | PRINTS | Expansin/Lol pI family signature | 64 | 82 | IPR007118 | GO:0005576 | |
| Lele41g0633 | 224 | SUPERFAMILY | Barwin-like endoglucanases | 39 | 118 | IPR036908 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele41g0633 | Lele-ChrLele41 | 16281049 | 16284857 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele41g0633 | 28 | 203 | Expansin Gene Family | AT1G65680 | 47.032 | 1.73e-67 | 207 |