Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0628 ATGTGGATTGGAATGCTTGATCCACCAAGAGATGAAGTAAGAAGTGCAATGCTTTCATGCATGACTGCTGGCATACGTGTTATAGTTGTTATCAAACTCTTGGGAACCTTTTTGTTAAATTTTAGCATTCAGCCTTCAATATTTATTAATGAAGTAAGAAATGCAATGCTTTCATGCATGACTGCTGATCACTTGGAATTTAATGAACATTCCTATTCTGCTTCTGAGTTTGAAGAACTTCCAGCTCTGCAGCAAACGCTTGCTTTGCAACATATGGCTCTTTTTGCCAGGATGCTGGTTGAAGCATTGCAGCACCAGAAAGAAGTGGTTGCTATGATTAGTGACGGTGTCAATGATGCACCTGCACTGAAGAAGGCAGACATAGGAATCGCTATGGGTTCAGACATGGTACCGGCTGATGATAACTTTGCTACAATTGTTGTGGCTGTGGCAGAGGGAATGACCATATACAATAATACAGAGCAGGTCATAACACACACGATCTCTTCTAATACTGGTGAAGTAGTCTGTATATTTGTGGCAGCTATGCTTGGAATTCCTAATACCCTTGCCCCTGTGAGTATCTGA 588 0.4133 MWIGMLDPPRDEVRSAMLSCMTAGIRVIVVIKLLGTFLLNFSIQPSIFINEVRNAMLSCMTADHLEFNEHSYSASEFEELPALQQTLALQHMALFARMLVEALQHQKEVVAMISDGVNDAPALKKADIGIAMGSDMVPADDNFATIVVAVAEGMTIYNNTEQVITHTISSNTGEVVCIFVAAMLGIPNTLAPVSI 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0628 195 SUPERFAMILY Calcium ATPase, transmembrane domain M 153 194 IPR023298 -
Lele41g0628 195 Pfam haloacid dehalogenase-like hydrolase 99 127 - -
Lele41g0628 195 Gene3D - 9 148 IPR023214 -
Lele41g0628 195 SUPERFAMILY HAD-like 3 152 IPR036412 -
Lele41g0628 195 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 99 193 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele41g0628 195 Gene3D - 149 195 - -
Lele41g0628 195 PANTHER CALCIUM-TRANSPORTING ATPASE 3 183 - -
Lele41g0628 195 PRINTS P-type cation-transporting ATPase superfamily signature 1 12 - -
Lele41g0628 195 PRINTS P-type cation-transporting ATPase superfamily signature 23 33 - -
Lele41g0628 195 PRINTS P-type cation-transporting ATPase superfamily signature 113 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0628 Lele-ChrLele41 16163895 16165578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0628 3 195 Primary Pumps ATPases(2) AT1G10130 60.766 1.10e-69 226