Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0620 ATGACTTCCGGTGTCTTTTCTACAAAGGAACAATCATCAGAACTAAGAAATCGTGCTTTTTCTTATTCCGATGTCCTTGAGATCACAAATAACTTACAAAACTTGATTGGAGAAGGCGGATTTGGAAAAGTTTACTTAGGCATCCTTAAGAATTGCACTCAAGTTGCAGTAAAGTTACTTTCTGAATCATCAAGGCAAGGTCATAGAGAATTTCGATCAGAGGTGGAACTTTTGATGTTTATTCATCATAGACATTTAGTTCCTCTGATTGGATATTGTGAAGAAGGAGACGTCAGGGCGTTAATATATGAATATATGGCTAATGGGAACCTCCATCATCATTTATCAAGTAAGAAAGGAGGTGAATTGAAATGGAAAGACAGGCTTCAAATTGCATTGGATGCAGCGTTTGATTTTGGATTGTCTAGAGCTTTTGCAAATGATATTGATAGTCATGTCTCAACTCGTCCAGCTGGGACATTTGGTTACCTTGATCCTGAATTTCAAAGTTCCGGAAACCTGACGAAAGGGAGCGATATTTATAGTTTTGGAGTAATTCTGCTAGAACTAGTGACCGGAAAGCCAGCAGCAAAAAGACAACCAGACAATTCTTTAAGTATTTTACTTCACTGGGTTTTACCAAAACTTCAAAGCAAGGATATACAATCCATTGTTGATCCAAGGTTAAAAGGACAATACAATGTTGATTCTGCTTGGAAATTTCTGGAGATAGCCATGTCATGCACCGCACCACTTGCAATTCAGAGGCCTGATATAAGTCAAGTGGTAGTTGAACTAAGGGAATGTTTGGCAATGGAGACAAGAATGGAAGGGACCACTCACAAAACCAATTCAAGCAGTTCCTTGGATATGAGTAATTCGCAATTTGATTCCACCTTTAGTGCTCCATCTGCTAGATAG 921 0.3865 MTSGVFSTKEQSSELRNRAFSYSDVLEITNNLQNLIGEGGFGKVYLGILKNCTQVAVKLLSESSRQGHREFRSEVELLMFIHHRHLVPLIGYCEEGDVRALIYEYMANGNLHHHLSSKKGGELKWKDRLQIALDAAFDFGLSRAFANDIDSHVSTRPAGTFGYLDPEFQSSGNLTKGSDIYSFGVILLELVTGKPAAKRQPDNSLSILLHWVLPKLQSKDIQSIVDPRLKGQYNVDSAWKFLEIAMSCTAPLAIQRPDISQVVVELRECLAMETRMEGTTHKTNSSSSLDMSNSQFDSTFSAPSAR 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0620 306 Pfam Protein kinase domain 138 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0620 306 ProSiteProfiles Protein kinase domain profile. 30 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0620 306 Pfam Protein tyrosine and serine/threonine kinase 32 136 IPR001245 GO:0004672|GO:0006468
Lele41g0620 306 FunFam Leucine-rich repeat receptor-like protein kinase 7 105 - -
Lele41g0620 306 SUPERFAMILY Protein kinase-like (PK-like) 16 299 IPR011009 -
Lele41g0620 306 Gene3D Transferase(Phosphotransferase) domain 1 137 294 - -
Lele41g0620 306 ProSitePatterns Protein kinases ATP-binding region signature. 36 58 IPR017441 GO:0005524
Lele41g0620 306 MobiDBLite consensus disorder prediction 276 306 - -
Lele41g0620 306 MobiDBLite consensus disorder prediction 277 306 - -
Lele41g0620 306 Gene3D Transferase(Phosphotransferase) domain 1 9 136 - -
Lele41g0620 306 PANTHER OS07G0107800 PROTEIN-RELATED 15 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0620 Lele-ChrLele41 16085336 16087520 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0620 20 292 Receptor kinase-like Gene Family AT2G28970 45.779 8.26e-87 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele41g0620 Pkinase 2.1e-09 CL0016