Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0618 ATGGCGAAGCTCTGGCAGTGGAGATCCCGTCGCCATAAGTGGTGGCAGCGCGAAGAATTCAAGAATGGAGAAGGCTCCACAATGGATTCTTTGGTTCTTGTTGATCCAACTTTTCCTGCTTGGCAACGCGTTGCTAAATGGAATGAAACTCACAACCAGCAACGCGCACGATGGATTATCTCACTAAACTTGAGCGCTAGCAAGTTAAGAGGACAAATAGCTGCTTCATTTTCACAACTTACAGAGTTAGAGTCCTTGGATTTATCAAGCAATGACTTGTCAGGAACCATACCAGAATTTCTGGCTAAATTGCCGAAGTTGAGAATTCTTAATTTGAGTGGCAACAAGCTTACAGGTTCAATTCCCAAGGCTCTTAAAGAAAAGTCAGATTTGGACATGAGTTATAATGATAATCCTAGTCTTTGTACGATGGATCCATGCAAAAAGAATAAGTTCCTTATTCCTCTTATAGGATCTGTTTCAGCTTTGATGGTTGTAATCTTGATTATTTCTCTAGGACTTTGCATATGCAAAATGAAAAAGCTGAAAGCTTCTACAAAGCAACAATCATCAGAACTAAGAAATCGTGCCTTTTCCTACTCCGATGTCCTTGAGATCACTAATAACTTACAAAATTTGATTGGAGAAGGTGGATTTGGAAAAGTTTACTTAGGCATCCTTAAGAATTGCACTCAAGTTGCAGTAAAGTTACTTTCTGAATCATCAATGCAAGGTCATAGAGAATTTCGATCAGAGGTAGAACTTTTGATGATTATTCATCATAGACACTTAGTTTCTCTGATTGGATATTGCGAAGAAAGAGACGTCAGGGCATTAATATATGAATATATGGCTAATGGGAACCTCCATTATCTTTTATCAGGTAATAAAGGAGGTGAATTGAAATGGAAAGATAGGCTTCAAATTGCATTGGATGCAGCTAATGGATTGGATTATTTACATAATGGATGTAAGCCTGCAATCGTGCATAGAGACCTTAAGGCCTCCAATATTTTGCTGGACAATAATATGGAAGCTAAGATTGCTGACTTTGGATTGTCAAGAGCTTTTGCAAATGATATTGATAGTCATGTCTCAACTCGTCCTGCTGGAACATTTGGTTACCTTGATCCTGAATTTCAAAAATCTGGAAACCTTACAAAAGGGAGTGATGTTTATAGTTTTGGAATAATTCTACTAGAACTAGTGACCGGAAAACCAGCAGCCGAAAGGCAACCAAATAATACTTTCATTCTCCTCCTTGATTGGGTCAGCCCCAAACTTGTAAACAAGGATATCCAGTCCATCGTTGATCCAAGGTTAAAAGGACAATATTGTGTTGATTCTGCTGGGAAATTTCTTGAGATAGCCATGTCATGCACATCAACACTTGCAATTCAGAGGCCAGATATAAGTCAAGTGGCAGTTGAACTAAGGGAATGTTTGGCAATGGAGATAAGAATGGAAGGGACCAGTAACAACACTGCCAATTCAGGCAGTTCCTTGGATATGAGTACTTCGCAATTTGATTCAACCTTTACTGCTCCATCTGCTAGATAG 1560 0.3904 MAKLWQWRSRRHKWWQREEFKNGEGSTMDSLVLVDPTFPAWQRVAKWNETHNQQRARWIISLNLSASKLRGQIAASFSQLTELESLDLSSNDLSGTIPEFLAKLPKLRILNLSGNKLTGSIPKALKEKSDLDMSYNDNPSLCTMDPCKKNKFLIPLIGSVSALMVVILIISLGLCICKMKKLKASTKQQSSELRNRAFSYSDVLEITNNLQNLIGEGGFGKVYLGILKNCTQVAVKLLSESSMQGHREFRSEVELLMIIHHRHLVSLIGYCEERDVRALIYEYMANGNLHYLLSGNKGGELKWKDRLQIALDAANGLDYLHNGCKPAIVHRDLKASNILLDNNMEAKIADFGLSRAFANDIDSHVSTRPAGTFGYLDPEFQKSGNLTKGSDVYSFGIILLELVTGKPAAERQPNNTFILLLDWVSPKLVNKDIQSIVDPRLKGQYCVDSAGKFLEIAMSCTSTLAIQRPDISQVAVELRECLAMEIRMEGTSNNTANSGSSLDMSTSQFDSTFTAPSAR 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0618 519 FunFam Leucine-rich repeat receptor-like protein kinase 182 283 - -
Lele41g0618 519 ProSiteProfiles Leucine-rich repeat profile. 106 128 IPR001611 GO:0005515
Lele41g0618 519 CDD STKc_IRAK 214 478 - -
Lele41g0618 519 ProSitePatterns Protein kinases ATP-binding region signature. 214 236 IPR017441 GO:0005524
Lele41g0618 519 SUPERFAMILY Protein kinase-like (PK-like) 189 476 IPR011009 -
Lele41g0618 519 Pfam Leucine rich repeat 61 117 IPR001611 GO:0005515
Lele41g0618 519 ProSiteProfiles Protein kinase domain profile. 208 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0618 519 Gene3D Phosphorylase Kinase; domain 1 179 283 - -
Lele41g0618 519 Gene3D Transferase(Phosphotransferase) domain 1 284 501 - -
Lele41g0618 519 MobiDBLite consensus disorder prediction 492 519 - -
Lele41g0618 519 Gene3D Ribonuclease Inhibitor 18 143 IPR032675 -
Lele41g0618 519 PANTHER OS07G0107800 PROTEIN-RELATED 35 487 - -
Lele41g0618 519 SUPERFAMILY L domain-like 60 141 - -
Lele41g0618 519 SMART serkin_6 208 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0618 519 PRINTS Leucine-rich repeat signature 83 96 - -
Lele41g0618 519 PRINTS Leucine-rich repeat signature 104 117 - -
Lele41g0618 519 FunFam Leucine-rich repeat receptor-like kinase 35 144 - -
Lele41g0618 519 ProSitePatterns Serine/Threonine protein kinases active-site signature. 328 340 IPR008271 GO:0004672|GO:0006468
Lele41g0618 519 Pfam Protein tyrosine and serine/threonine kinase 210 475 IPR001245 GO:0004672|GO:0006468
Lele41g0618 519 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 284 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0618 Lele-ChrLele41 16066260 16074931 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0618 49 519 Receptor kinase-like Gene Family AT1G07560 46.250 1.50e-134 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele41g0618 PK_Tyr_Ser-Thr 6.6e-50 CL0016