Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0616 ATGGATGCAATGAAACTCACCACCAACGACGCCCACCCTGGTAAAGTGCCCAATGTTTCCATATGTTTCTTTGGTTCGATCACAAAGCTTTCCTTTAGTTTAAAGCCAGACATAGTTTGCTACCAAATAGATGTGGGTGCCATTTTGGACATAAAAAACATATACAAAATCTCCAAGGCAGACTGGCAAGGAGATCCATGTGTTCCCAAGGAATATGCATCATGGGAGGGACTTGGCTGCACATATGGTATCAATGATTCCAACGCAAGGATCACCTCATTAAACTTGAGCATGAGCAAGTTAAGAGGACACATAGCTACTTCATTTTCACTACTCACAGAGTTAGAGTCGCTGGATTTGTCAGGGAATGATTTATCAGGATCAATACCAAAATTTCTAGCTGAATTGAGAAAGTTGAGAGTTCTCAGTTTGAAGGGCAACATGCTTACGGGCTCAATTCCCAAAGCTCTTCAGGACAAGCCAGATCTGGAAATGAGTTTAGATGATAATCCTGGCCTCTGTTTGAGGGATCCATGCAGAAAGCAGAAGTTCGTTATTCCACTAATTGTATCTGTTTCAGCTTTGACTGTTATAATCTTGGTTTGTCTTGGAATATGGATTTTCAAAATGATAAAAATGAGAGTGGATTCTACTGTTTCAACAAAGCAAGAAGCATCGGAATATTTAAGAAATCGTGCTTTTTCTTACTCTGAGGTTCTTGAGATCACCAATAACTTACAAAACTTGATTGGACAAGGAGGATTTGGAAAAGTTTATGTAGGCACTCTCAAGAATAATACTCAAGTTGCAGTAAAGTTACTTTCTCAATCATCAATGCAAGGTCATAGAGCATTTCGATCGGAGGTAGAAGTTTTGATGGTTGTTCATCATAGACACTTGGTTTCTTTGATCGGATACTGTGAAGAAAGTGGTGCTAGGGCATTAATTTATGAGTATATGGCTAATGGTGACCTCCACCAACATTTAATGGGTAAGAATGCGGGTGCTTTGAAATGGAAGGACAGGCTTCAAATTGCATTGGACGCAGCACATGGTTTGGATTATTTGCATAATGGGTGTAAGCCAGCAATTGTGCATAGAGACCTAAAGGCTTCCAACATTTTGTTAGACAAAAATATGGAAGCTAAGATCGGTGACTTTGGATTGTCAAGAGCTTTTACAAATGATATTGATAGTCATGTCTCAACTTGTCCTGCTGGAACATTTGGATACCTTGATCCTGAATTTCATACTTCTGGAAACCTGACAAAAGGAAGTGATATTTATAGTTTTGGAGTAATTCTATTAGAGCTAATTACTGGGAAACCAGCAGCAAAAAGACAACCAGACAATACTTTCAGTCTCCTACTTCAATGGGTCACCCTTAAACTTGGAAGCAAGGATATTCAATCCATCATTGATCCAGGGTTGCAAGGAAAATTCAGTGCTGATTCTGCTCGGAAATTTCTTGAGATAGCCATATCATGCACTGCACCATCTGCAATTCAAAGGCCTGATATAAGTCAAGTTGTAGTTGAATTAAGGGAATGTTTGGCAATGGAATTAAGCTTGGAAAGGACTGGTCACAACAGCACCAATTCAAGCAGTTCCATGGATACGTTGAGCGCCTCGAAATTTGATTCGGACTTTAGTACTCCGTCTGCTAGATAA 1671 0.3962 MDAMKLTTNDAHPGKVPNVSICFFGSITKLSFSLKPDIVCYQIDVGAILDIKNIYKISKADWQGDPCVPKEYASWEGLGCTYGINDSNARITSLNLSMSKLRGHIATSFSLLTELESLDLSGNDLSGSIPKFLAELRKLRVLSLKGNMLTGSIPKALQDKPDLEMSLDDNPGLCLRDPCRKQKFVIPLIVSVSALTVIILVCLGIWIFKMIKMRVDSTVSTKQEASEYLRNRAFSYSEVLEITNNLQNLIGQGGFGKVYVGTLKNNTQVAVKLLSQSSMQGHRAFRSEVEVLMVVHHRHLVSLIGYCEESGARALIYEYMANGDLHQHLMGKNAGALKWKDRLQIALDAAHGLDYLHNGCKPAIVHRDLKASNILLDKNMEAKIGDFGLSRAFTNDIDSHVSTCPAGTFGYLDPEFHTSGNLTKGSDIYSFGVILLELITGKPAAKRQPDNTFSLLLQWVTLKLGSKDIQSIIDPGLQGKFSADSARKFLEIAISCTAPSAIQRPDISQVVVELRECLAMELSLERTGHNSTNSSSSMDTLSASKFDSDFSTPSAR 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0616 556 Gene3D Transferase(Phosphotransferase) domain 1 320 538 - -
Lele41g0616 556 ProSitePatterns Serine/Threonine protein kinases active-site signature. 364 376 IPR008271 GO:0004672|GO:0006468
Lele41g0616 556 FunFam Leucine-rich repeat receptor-like protein kinase 217 319 - -
Lele41g0616 556 FunFam Leucine-rich repeat receptor-like kinase 43 175 - -
Lele41g0616 556 CDD STKc_IRAK 250 514 - -
Lele41g0616 556 MobiDBLite consensus disorder prediction 527 556 - -
Lele41g0616 556 SUPERFAMILY Protein kinase-like (PK-like) 224 514 IPR011009 -
Lele41g0616 556 Gene3D Ribonuclease Inhibitor 46 172 IPR032675 -
Lele41g0616 556 Pfam Protein tyrosine and serine/threonine kinase 246 513 IPR001245 GO:0004672|GO:0006468
Lele41g0616 556 Gene3D Phosphorylase Kinase; domain 1 216 319 - -
Lele41g0616 556 ProSiteProfiles Protein kinase domain profile. 244 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0616 556 SMART serkin_6 244 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0616 556 SUPERFAMILY L domain-like 40 164 - -
Lele41g0616 556 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 320 527 - -
Lele41g0616 556 PANTHER OS07G0107800 PROTEIN-RELATED 41 523 - -
Lele41g0616 556 ProSitePatterns Protein kinases ATP-binding region signature. 250 272 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0616 Lele-ChrLele41 16030040 16039337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0616 44 556 Receptor kinase-like Gene Family AT2G28970 45.591 3.83e-152 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele41g0616 PK_Tyr_Ser-Thr 1.1e-50 CL0016