Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0612 ATGAAAGACTTTGCGGGTGCTTTGGGGTTGACACATAAGCAAGTTCAAGATTGAAAGATACACAAAATGATATCTGTCAAATCAGAAGCTAATTCTCGTTCACCATCAGGATACAATGCAGTTATAAATAGGAATGTTAAGAAGCAGAAAAGTCATCAGGATTTGCTTACAGCAAACTGCATTCTAAAAAAGGTGTTCCACAAGAGTGGCCCTTCTTTAGATGAGGAATTTGATTCTCTTCATCCAGGTCCATCCCTCCACCATGTTGGCTCCTTTAGTACACCATATAGGATAGGACTCGATAGGATGAGTCCTAAGGATTCAACAAGGCTTCATAAGGTTTTCCATTTTCTTTATACATATGCTACTGTTGTTAATATTTGCCCCTTCATTCTTGATGAGCTTGCTCAAGCGTTTCATGATAAGGACTCAATGCTACTTGGAAAGATTCATGTGGCCCTTCTTACACTTCTTCTATCTGACATTGTAGTGGAACTTACTAGTGGATTTCTTGTCCATTTACTTACCGCTTTTTGA 537 0.3873 MKDFAGALGLTHKQVQDXKIHKMISVKSEANSRSPSGYNAVINRNVKKQKSHQDLLTANCILKKVFHKSGPSLDEEFDSLHPGPSLHHVGSFSTPYRIGLDRMSPKDSTRLHKVFHFLYTYATVVNICPFILDELAQAFHDKDSMLLGKIHVALLTLLLSDIVVELTSGFLVHLLTAF 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0612 178 SMART testlast3 105 164 IPR018501 -
Lele41g0612 178 Pfam DDT domain 114 161 IPR018501 -
Lele41g0612 178 ProSiteProfiles DDT domain profile. 105 164 IPR018501 -
Lele41g0612 178 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 107 162 IPR044977 GO:0006357
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0612 Lele-ChrLele41 15968267 15976009 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0612 104 162 Homeobox Transcription Factor Family AT5G44180 47.458 6.48e-12 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Lele41g0612 DDT 1.3e-07 No_clan