Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0602 ATGTCGGCTTCATCATCATCCACTAATTCTTCCTTTTCACCGGACCACCACCTCTCTCCCTCCGACCAGCTCTGCTATGTCCATTGCCATTTCTGCGACACTGTTCTGGCGGTGAGTGTTCCTTGCACCAGCTTGTTCAAGAGCGTCACGGTGAGATGCGGCCATTGCACCAACCTTCTGTCTGTGAATATGCGTGGCCCTCTTCTTCCTTCTGCCAATCATCATCAGCTTCACCTCGGACACAACTTCTTCCCCCCTCAGAATCTCCTGGAGGAAATTCGAAATGCACCATCTACAAATATGCAGATGATGAGCCATCATCATCATCAGCTTCCATACCCAAATAACGACTCAGTAATGAGCACCATGCGAGGAGGAGGAGCACTTGAAGAAATCCCTAAACCTCCACCACCACCAGCTAACAGACCTCCAGAAAAGAGACAGAGAGTTCCATCTGCTTACAACCGCTTCATCAAGGAAGAGATCCAACGCATCAAAGCTGGGAATCCTGATATAAGCCACAGAGAGGCTTTTAGTGCAGCTGCAAAGAATTGGGCCCATTTCCCCCACATACACTTCGGACTTATGCCTGATCATCAACCCGTGAAGAAAGCTAACGTGCGCCAGGAAGGAGAAGACGTGCTTATGAAAGAAGGGTTTTTGGGTCCCACAAACGTAGGTAACGGCTTTCTTCTGTAA 699 0.4907 MSASSSSTNSSFSPDHHLSPSDQLCYVHCHFCDTVLAVSVPCTSLFKSVTVRCGHCTNLLSVNMRGPLLPSANHHQLHLGHNFFPPQNLLEEIRNAPSTNMQMMSHHHHQLPYPNNDSVMSTMRGGGALEEIPKPPPPPANRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQPVKKANVRQEGEDVLMKEGFLGPTNVGNGFLL 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0602 232 SUPERFAMILY HMG-box 135 189 IPR036910 -
Lele41g0602 232 Gene3D High mobility group box domain 136 191 IPR036910 -
Lele41g0602 232 MobiDBLite consensus disorder prediction 131 145 - -
Lele41g0602 232 MobiDBLite consensus disorder prediction 122 150 - -
Lele41g0602 232 PANTHER PROTEIN YABBY 6-RELATED 7 207 IPR006780 GO:0007275
Lele41g0602 232 Pfam YABBY protein 20 195 IPR006780 GO:0007275
Lele41g0602 232 FunFam Axial regulator YABBY 140 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0602 Lele-ChrLele41 15724589 15729201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0602 31 227 C2C2-YABBY Transcription Factor Family AT4G00180 65.238 2.48e-71 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Lele41g0602 YABBY 1.1e-71 CL0114