Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0581 ATGGAAAGTGATGCCCAAGGCACCTTTGGTTCATCCTCTTCTTCTCCATCATCTTCTTCTTCTTCTTTTTCTTCTTCTTTTTCTTCATCATCGTCATCATCATCAAATTCAGATTCAGGTACCAAGAGAGATTCAACAAGTGTTTCAGATCAGAATAATGGTGATTATTCCTGCAACAACAACAAGAAGAAGAAGCATATCAGAAGTGACGAAAAGGATAATCATAATAACAATAAGGATCCATCGTACAGAGGTGTGAGGATGAGGAACTGGGGAAAATGGGTTTCAGAGATTCGTGAGCCCAGGAAGAAATCCAGAATATGGCTTGGAACTTACCCTACTGCAGAAATGGCGGCTCGAGCTCACGATGTCGCGGCTTTAGCCATCAAAGGTCCTTCGGCTTACCTCAATTTCCCTCACTTGGCTGCGGAGCTTCCCCGGCCGGCCACCACTGCTCCGAAGGATATCCAAGAAGCCGCCGCGAAGGCTGCGGCTACTGTCTTTGAGGTGGCAAGTAATAATAAGCATTGTCAAGTCGAGGAAGCCGAGGCTGGGCTGGGCCATGCCGAGCCGGCCTCATCATCTTCGATTCAAGATCAGTCTTCTTGTTCTGAAATATCGTCGTCAAAGGAAGAAGACGCAGCTTTGTTTGACCTACCAGATCTTTTCACTGATGGCAACAATGGTCTTTGTTCTTATTCTTCTGTTTCTTCTTCATCTTCTTCTTCTTGGAATTTTTGTGCAGCTGATAGGGGCTTCAGGCTTGAGGAGCCATTTCTCTGGGAAAATTACTAG 795 0.4566 MESDAQGTFGSSSSSPSSSSSSFSSSFSSSSSSSSNSDSGTKRDSTSVSDQNNGDYSCNNNKKKKHIRSDEKDNHNNNKDPSYRGVRMRNWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGPSAYLNFPHLAAELPRPATTAPKDIQEAAAKAAATVFEVASNNKHCQVEEAEAGLGHAEPASSSSIQDQSSCSEISSSKEEDAALFDLPDLFTDGNNGLCSYSSVSSSSSSSWNFCAADRGFRLEEPFLWENY 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0581 264 MobiDBLite consensus disorder prediction 59 82 - -
Lele41g0581 264 SUPERFAMILY DNA-binding domain 82 140 IPR016177 GO:0003677
Lele41g0581 264 Gene3D AP2/ERF domain 82 140 IPR036955 GO:0003700|GO:0006355
Lele41g0581 264 CDD AP2 81 141 IPR001471 GO:0003700|GO:0006355
Lele41g0581 264 SMART rav1_2 82 145 IPR001471 GO:0003700|GO:0006355
Lele41g0581 264 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 47 226 - -
Lele41g0581 264 MobiDBLite consensus disorder prediction 184 204 - -
Lele41g0581 264 MobiDBLite consensus disorder prediction 1 85 - -
Lele41g0581 264 FunFam Ethylene-responsive transcription factor 2 82 140 - -
Lele41g0581 264 Pfam AP2 domain 81 131 IPR001471 GO:0003700|GO:0006355
Lele41g0581 264 PRINTS Ethylene responsive element binding protein signature 83 94 IPR001471 GO:0003700|GO:0006355
Lele41g0581 264 PRINTS Ethylene responsive element binding protein signature 105 121 IPR001471 GO:0003700|GO:0006355
Lele41g0581 264 ProSiteProfiles AP2/ERF domain profile. 82 139 IPR001471 GO:0003700|GO:0006355
Lele41g0581 264 MobiDBLite consensus disorder prediction 1 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0581 Lele-ChrLele41 15086319 15087113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0581 72 260 AP2-EREBP Transcription Factor Family AT2G44940 51.163 4.06e-66 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele41g0581 AP2 2.5e-14 CL0081