Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0572 ATGGACTTTGAGGGGAACAGCATGTTCTGTTTGAGCAACGCTAATAACAGAGAGCAGAACGGTGGTGGAAATAGTAATAACAGTTCCAACTTTTCTTGGGATTTATGGGAACCACCTTCTTCTAACAATTCTACCCTCATAAATACTTTCTACTCCGCCGCCGATTCGGCGGAGACCTCGGTTGCTGCTGCTGCCGCCACCACTCGCCACGGGGCTGGGCTCGCAAACGCGCTGATGTTTCTTCCTCCTCCTCCTCAGGCTAGTAGTAGTACTGCGGCTGATTGTGACCACGACAACGGCGGCGGCGTTGACCTCGGTGGCCATCATCATCATCATCAACAACGGCGACAACAACAGCAGGAGGACGTACTGTACTCCGGCGATGGGGCTCACGTGCATCTAGACCCACATCTCATGTGCTTGAAGCTGGGGAAGAGGCATTATTTTGAGGACGCTAATGCTCCTCCTCTTGGCGGTGCCGTAGGCGGAGGCGGAGTCTGTGGTGGGTTTGCTTCGGCGGGAAAGAGAGGGAGAGGAGGGTTCTATGGAGGAGGCAGTGTGAAGACAGCGACGACGGCCGCAACAACGACGACGGTGCCAAGGTGTCAGGTGGAGGGATGCCACGTGGCGCTGTTGAACGCGAAGGAATACCACCGGAGACACAAAGTTTGTGAGATGCATTCCAAGGCACCCAAGGTTGTCGTGTTAGGGTTGGAGCAGAGATTTTGTCAACAGTGTAGCAGGTTTCATGTGGTATCGGAGTTCGATGATTCCAAGAGGAGTTGCCGTAGGAGATTGGCGGGCCACAATGAACGAAGAAGAAAGAGCTTTCACGATTCTGTCACTAGGAGTTCCTCTTCTCAAGAAAATAAGTTACTGGTTGGAGGGATTCCGAACTTATCATCACCCCCGCCGATATCATCCGGCGGCGGGTGTGCTCTCTCTCTTCTGTCATCGTCTAAGAGTGACCATCCGTGGCTTTCTCCGGCCGATCTCTCAGGAAGATGCAGCGCCGCCCTACGTGAACTCATAGCCGAGAACCGGGCAGCCGCCATGGCTAAACAAATCATTTTGGAAAGAGACTGGAACCCACACCACCACTACCACCAAGAATATGATGACGACGACGACCATAATAAGGAGATCCAACTTCAATCCAATTACAATTTCTCTCAATACCACCAAATGTTTCCCTAG 1197 0.5255 MDFEGNSMFCLSNANNREQNGGGNSNNSSNFSWDLWEPPSSNNSTLINTFYSAADSAETSVAAAAATTRHGAGLANALMFLPPPPQASSSTAADCDHDNGGGVDLGGHHHHHQQRRQQQQEDVLYSGDGAHVHLDPHLMCLKLGKRHYFEDANAPPLGGAVGGGGVCGGFASAGKRGRGGFYGGGSVKTATTAATTTTVPRCQVEGCHVALLNAKEYHRRHKVCEMHSKAPKVVVLGLEQRFCQQCSRFHVVSEFDDSKRSCRRRLAGHNERRRKSFHDSVTRSSSSQENKLLVGGIPNLSSPPPISSGGGCALSLLSSSKSDHPWLSPADLSGRCSAALRELIAENRAAAMAKQIILERDWNPHHHYHQEYDDDDDHNKEIQLQSNYNFSQYHQMFP 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0572 398 MobiDBLite consensus disorder prediction 14 34 - -
Lele41g0572 398 Gene3D - 193 263 IPR036893 GO:0003677|GO:0005634
Lele41g0572 398 MobiDBLite consensus disorder prediction 266 304 - -
Lele41g0572 398 MobiDBLite consensus disorder prediction 281 304 - -
Lele41g0572 398 SUPERFAMILY SBT domain 200 280 IPR036893 GO:0003677|GO:0005634
Lele41g0572 398 Pfam SBP domain 202 275 IPR004333 GO:0003677
Lele41g0572 398 FunFam Squamosa promoter-binding-like protein 14 193 263 - -
Lele41g0572 398 MobiDBLite consensus disorder prediction 82 121 - -
Lele41g0572 398 ProSiteProfiles Zinc finger SBP-type profile. 199 276 IPR004333 GO:0003677
Lele41g0572 398 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 173 331 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0572 Lele-ChrLele41 14913936 14916340 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0572 139 275 SBP-box Gene Family AT1G27370 49.286 1.12e-35 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele41g0572 SBP 1.6e-31 No_clan